RNA–Protein interactions for RNA: ENST00000609081.1

LMBR1-220, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-220ENST00000609081 SLC7A9P82251 487 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 TAF10Q12962 218 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 USP4Q13107 963 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 RUNX3Q13761 415 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 MORC3Q14149 939 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 MTF1Q14872 753 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 ZNF77Q15935 545 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 DCAF17Q5H9S7 520 aaPredicted RBP16.01■□□□□ 0.15
LMBR1-220ENST00000609081 SNX30Q5VWJ9 437 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 PAQR9Q6ZVX9 377 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 DDX42Q86XP3 938 aaKnown RBP eCLIP16.01■□□□□ 0.15
LMBR1-220ENST00000609081 GPIHBP1Q8IV16 184 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 ARL14EPQ8N8R7 260 aaPredicted RBP16.01■□□□□ 0.15
LMBR1-220ENST00000609081 SLC2A14Q8TDB8 520 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 ERCC4Q92889 916 aaPredicted RBP16.01■□□□□ 0.15
LMBR1-220ENST00000609081 NKD2Q969F2 451 aaPredicted RBP16.01■□□□□ 0.15
LMBR1-220ENST00000609081 EEF2KMTQ96G04 330 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 ZFYVE19Q96K21 471 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 APOBEC3GQ9HC16 384 aaKnown RBP16.01■□□□□ 0.15
LMBR1-220ENST00000609081 KRT82Q9NSB4 513 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 TMEM30AQ9NV96 361 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 FAM86C1Q9NVL1 165 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 GTSE1Q9NYZ3 720 aa16.01■□□□□ 0.15
LMBR1-220ENST00000609081 NDRG2Q9UN36 371 aaKnown RBP16.01■□□□□ 0.15
LMBR1-220ENST00000609081 RIF1Q5UIP0 2472 aaKnown RBP16.01■□□□□ 0.15
LMBR1-220ENST00000609081 COL4A3Q01955 1670 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 C2orf78A6NCI8 922 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 TNFRSF10BO14763 440 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 PMM2O15305 246 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 OAS1P00973 400 aaKnown RBP16■□□□□ 0.15
LMBR1-220ENST00000609081 FAM200BP0CF97 657 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 SP9P0CG40 484 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 SLC5A3P53794 718 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 CACNA2D1P54289 1103 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 YWHAEP62258 255 aaKnown RBP16■□□□□ 0.15
LMBR1-220ENST00000609081 CETN1Q12798 172 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 NR1H3Q13133 447 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 CPA6Q8N4T0 437 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 OSCP1Q8WVF1 389 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 ATP2A3Q93084 1043 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 FBXO32Q969P5 355 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 SLC35C1Q96A29 364 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 CYFIP2Q96F07 1278 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 KCNK16Q96T55 309 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 LMAN1LQ9HAT1 526 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 HMGXB4Q9UGU5 601 aa16■□□□□ 0.15
LMBR1-220ENST00000609081 ZFHX2Q9C0A1 2572 aaPredicted RBP15.99■□□□□ 0.15
LMBR1-220ENST00000609081 FAM186AA6NE01 2351 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 TRIM49BA6NDI0 452 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 SLC9A3R1O14745 358 aaPredicted RBP15.99■□□□□ 0.15
LMBR1-220ENST00000609081 P4HA2O15460 535 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 FGFR1OPO95684 399 aaKnown RBP15.99■□□□□ 0.15
LMBR1-220ENST00000609081 CHRNB1P11230 501 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 CCDC130P13994 396 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 TBXAS1P24557 533 aaPredicted RBP15.99■□□□□ 0.15
LMBR1-220ENST00000609081 IFNAR2P48551 515 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 CCR3P51677 355 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 TNK2Q07912 1038 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 TTI2Q6NXR4 508 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 SH3RF2Q8TEC5 729 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 SEMA4DQ92854 862 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 ELMO3Q96BJ8 720 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 SLC22A12Q96S37 553 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 CYP2S1Q96SQ9 504 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 PHOX2BQ99453 314 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 PRMT8Q9NR22 394 aaPredicted RBP15.99■□□□□ 0.15
LMBR1-220ENST00000609081 DUS2Q9NX74 493 aaKnown RBP15.99■□□□□ 0.15
LMBR1-220ENST00000609081 KIAA1468Q9P260 1216 aa15.99■□□□□ 0.15
LMBR1-220ENST00000609081 PPP1R3GB7ZBB8 358 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 GFRA3O60609 400 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 ABL1P00519 1130 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 CD44P16070 742 aaKnown RBP15.98■□□□□ 0.15
LMBR1-220ENST00000609081 CD58P19256 250 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 PTPRZ1P23471 2315 aaPredicted RBP15.98■□□□□ 0.15
LMBR1-220ENST00000609081 NRLP54845 237 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 GRSF1Q12849 480 aaKnown RBP eCLIP15.98■□□□□ 0.15
LMBR1-220ENST00000609081 PAK1Q13153 545 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 CCDC40Q4G0X9 1142 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 HECTD3Q5T447 861 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 ISM2Q6H9L7 571 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 KLHL10Q6JEL2 608 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 SPEM1Q8N4L4 309 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 C12orf29Q8N999 325 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 NELFBQ8WX92 580 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 SMOQ99835 787 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 EBF3Q9H4W6 596 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 HPS4Q9NQG7 708 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 CISHQ9NSE2 258 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 FAM49BQ9NUQ9 324 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 PCDHGA2Q9Y5H1 932 aa15.98■□□□□ 0.15
LMBR1-220ENST00000609081 TRDMT1O14717 391 aaKnown RBP15.97■□□□□ 0.15
LMBR1-220ENST00000609081 NFATC1O95644 943 aa15.97■□□□□ 0.15
LMBR1-220ENST00000609081 ZDHHC11BP0C7U3 371 aa15.97■□□□□ 0.15
LMBR1-220ENST00000609081 BMP6P22004 513 aa15.97■□□□□ 0.15
LMBR1-220ENST00000609081 SOX9P48436 509 aa15.97■□□□□ 0.15
LMBR1-220ENST00000609081 MARSP56192 900 aaKnown RBP15.97■□□□□ 0.15
LMBR1-220ENST00000609081 MAP3K7CLP57077 242 aa15.97■□□□□ 0.15
LMBR1-220ENST00000609081 SLC8A3P57103 927 aa15.97■□□□□ 0.15
LMBR1-220ENST00000609081 IFRD2Q12894 506 aaPredicted RBP15.97■□□□□ 0.15
LMBR1-220ENST00000609081 MTAPQ13126 283 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms