RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 ZNF541Q9H0D2 1346 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 CNTNAP2Q9UHC6 1331 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 MCF2LO15068 1137 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 ASS1P00966 412 aaKnown RBP23.33■■□□□ 1.33
SHANK2-220ENST00000608988 LYNP07948 512 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 SNRPAP09012 282 aaKnown RBP23.33■■□□□ 1.33
SHANK2-220ENST00000608988 WEE2P0C1S8 567 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 CCND2P30279 289 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 ACOT2P49753 483 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 RPS6P62753 249 aaKnown RBP23.33■■□□□ 1.33
SHANK2-220ENST00000608988 CUL3Q13618 768 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 HNRNPDQ14103 355 aaKnown RBP23.33■■□□□ 1.33
SHANK2-220ENST00000608988 SLC5A9Q2M3M2 681 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 FOXB2Q5VYV0 432 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 FAM84AQ96KN4 292 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 OLFM3Q96PB7 478 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 SRPK1Q96SB4 655 aaKnown RBP23.33■■□□□ 1.33
SHANK2-220ENST00000608988 ALG13Q9NP73 1137 aaKnown RBP23.33■■□□□ 1.33
SHANK2-220ENST00000608988 METTL5Q9NRN9 209 aaKnown RBP23.33■■□□□ 1.33
SHANK2-220ENST00000608988 SIRPGQ9P1W8 387 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 CHMP2BQ9UQN3 213 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 PLLPQ9Y342 182 aa23.33■■□□□ 1.33
SHANK2-220ENST00000608988 WDR81Q562E7 1941 aa23.33■■□□□ 1.32
SHANK2-220ENST00000608988 A0A0B4J269 797 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 FAM237BA0A1B0GVD1 139 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 AP1G2O75843 785 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 ASNSP08243 561 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 AMPD1P23109 780 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 SSTR3P32745 418 aaPredicted RBP23.32■■□□□ 1.32
SHANK2-220ENST00000608988 SOX10P56693 466 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 EIF3EP60228 445 aaKnown RBP23.32■■□□□ 1.32
SHANK2-220ENST00000608988 XIAPP98170 497 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 ACAP1Q15027 740 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 ARHGEF16Q5VV41 709 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 RIPOR1Q6ZS17 1223 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 KBTBD2Q8IY47 623 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 MTBPQ96DY7 904 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 CENPKQ9BS16 269 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 VCX3BQ9H321 246 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 C12orf65Q9H3J6 166 aaKnown RBP23.32■■□□□ 1.32
SHANK2-220ENST00000608988 VCX3AQ9NNX9 186 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 ZDHHC7Q9NXF8 308 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 SLC9A2Q9UBY0 812 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 ZNF70Q9UC06 446 aaPredicted RBP23.32■■□□□ 1.32
SHANK2-220ENST00000608988 WASF2Q9Y6W5 498 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 BIRC5O15392 142 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 PIM1P11309 404 aaPredicted RBP23.32■■□□□ 1.32
SHANK2-220ENST00000608988 NAMPTP43490 491 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 KBTBD12Q3ZCT8 623 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 MEX3CQ5U5Q3 659 aaKnown RBP23.32■■□□□ 1.32
SHANK2-220ENST00000608988 STYK1Q6J9G0 422 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 TTC7BQ86TV6 843 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 UNC45BQ8IWX7 931 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 ULK2Q8IYT8 1036 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 RBM15BQ8NDT2 890 aaKnown RBP23.32■■□□□ 1.32
SHANK2-220ENST00000608988 E2F7Q96AV8 911 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 GORASP1Q9BQQ3 440 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 MSTO1Q9BUK6 570 aa23.32■■□□□ 1.32
SHANK2-220ENST00000608988 STN1Q9H668 368 aaKnown RBP23.32■■□□□ 1.32
SHANK2-220ENST00000608988 CNTNAP1P78357 1384 aa23.31■■□□□ 1.32
SHANK2-220ENST00000608988 TCRBV7S3A2A0A539 114 aa23.31■■□□□ 1.32
SHANK2-220ENST00000608988 KBTBD13C9JR72 458 aa23.31■■□□□ 1.32
SHANK2-220ENST00000608988 H3BRJ5 948 aa23.31■■□□□ 1.32
SHANK2-220ENST00000608988 PDLIM1O00151 329 aa23.31■■□□□ 1.32
SHANK2-220ENST00000608988 POLE2P56282 527 aa23.31■■□□□ 1.32
SHANK2-220ENST00000608988 YWHAEP62258 255 aaKnown RBP23.31■■□□□ 1.32
SHANK2-220ENST00000608988 KCNJ11Q14654 390 aa23.31■■□□□ 1.32
SHANK2-220ENST00000608988 PHC3Q8NDX5 983 aa23.31■■□□□ 1.32
SHANK2-220ENST00000608988 ACSF2Q96CM8 615 aaPredicted RBP23.31■■□□□ 1.32
SHANK2-220ENST00000608988 PPARGC1AQ9UBK2 798 aaKnown RBP23.31■■□□□ 1.32
SHANK2-220ENST00000608988 SEPT9Q9UHD8 586 aaPredicted RBP23.31■■□□□ 1.32
SHANK2-220ENST00000608988 MYH9P35579 1960 aaKnown RBP23.31■■□□□ 1.32
SHANK2-220ENST00000608988 TESPA1A2RU30 521 aaPredicted RBP23.3■■□□□ 1.32
SHANK2-220ENST00000608988 ENO1P06733 434 aaKnown RBP23.3■■□□□ 1.32
SHANK2-220ENST00000608988 SERPINA6P08185 405 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 PSMC4P43686 418 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 YWHAGP61981 247 aaKnown RBP eCLIP23.3■■□□□ 1.32
SHANK2-220ENST00000608988 DYNLT1P63172 113 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 BASP1P80723 227 aaKnown RBP23.3■■□□□ 1.32
SHANK2-220ENST00000608988 WASHC5Q12768 1159 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 XKR3Q5GH77 459 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 GPAT2Q6NUI2 795 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 TRMT1LQ7Z2T5 733 aaKnown RBP23.3■■□□□ 1.32
SHANK2-220ENST00000608988 ALYREFQ86V81 257 aaKnown RBP23.3■■□□□ 1.32
SHANK2-220ENST00000608988 CRLF3Q8IUI8 442 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 WDR49Q8IV35 697 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 CMASQ8NFW8 434 aaPredicted RBP23.3■■□□□ 1.32
SHANK2-220ENST00000608988 CCDC106Q9BWC9 280 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 NIF3L1Q9GZT8 377 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 LHX5Q9H2C1 402 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 RSAD1Q9HA92 442 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 TRPC5Q9UL62 973 aaPredicted RBP23.3■■□□□ 1.32
SHANK2-220ENST00000608988 ADGRA2Q96PE1 1338 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 LRCH4O75427 683 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 PRKCEQ02156 737 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 IZUMO2Q6UXV1 221 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 ARCQ7LC44 396 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 VSIG10LQ86VR7 867 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 RFX6Q8HWS3 928 aa23.3■■□□□ 1.32
SHANK2-220ENST00000608988 PANX3Q96QZ0 392 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms