RNA–Protein interactions for RNA: ENST00000608858.5

CTCFL-220, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 905 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-220ENST00000608858 MTMR9Q96QG7 549 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 ZDHHC5Q9C0B5 715 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 TUFT1Q9NNX1 390 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 NXF1Q9UBU9 619 aaKnown RBP9.98□□□□□ -0.81
CTCFL-220ENST00000608858 SUSD2Q9UGT4 822 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 IL17BQ9UHF5 180 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 EIF2B4Q9UI10 523 aaKnown RBP9.98□□□□□ -0.81
CTCFL-220ENST00000608858 UBQLN1Q9UMX0 589 aaKnown RBP9.98□□□□□ -0.81
CTCFL-220ENST00000608858 NID2Q14112 1375 aa9.98□□□□□ -0.81
CTCFL-220ENST00000608858 CABIN1Q9Y6J0 2220 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 A0A0A0MRY4 1105 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 TTC26A0AVF1 554 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 ERVH48-1M5A8F1 160 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 BCAT2O15382 392 aaPredicted RBP9.97□□□□□ -0.81
CTCFL-220ENST00000608858 CLDN3O15551 220 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 ZNF217O75362 1048 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 C6P13671 934 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 ACAT1P24752 427 aaKnown RBP9.97□□□□□ -0.81
CTCFL-220ENST00000608858 NTSR1P30989 418 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 IL12RB1P42701 662 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 FOSBP53539 338 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 RAD51AP2Q09MP3 1159 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 SUZ12Q15022 739 aaKnown RBP9.97□□□□□ -0.81
CTCFL-220ENST00000608858 SF3A1Q15459 793 aaKnown RBP9.97□□□□□ -0.81
CTCFL-220ENST00000608858 PTPRNQ16849 979 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 CCDC142Q17RM4 750 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 LY6G5CQ5SRR4 150 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 C10orf76Q5T2E6 689 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 DCAF12L1Q5VU92 463 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 C9orf57Q5W0N0 161 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 EGFLAMQ63HQ2 1017 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 DIEXFQ68CQ4 756 aaKnown RBP9.97□□□□□ -0.81
CTCFL-220ENST00000608858 TMPRSS12Q86WS5 348 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 SPACA3Q8IXA5 215 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 DCP1BQ8IZD4 617 aaKnown RBP9.97□□□□□ -0.81
CTCFL-220ENST00000608858 IPO4Q8TEX9 1081 aaKnown RBP9.97□□□□□ -0.81
CTCFL-220ENST00000608858 BAP1Q92560 729 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 KIFAP3Q92845 792 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 FGF11Q92914 225 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 FOXJ1Q92949 421 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 NXPE2Q96DL1 559 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 TMEM134Q9H6X4 195 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 TMEM206Q9H813 350 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 SNX14Q9Y5W7 946 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 SNX11Q9Y5W9 270 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 SLCO1B1Q9Y6L6 691 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 OBSL1O75147 1896 aa9.97□□□□□ -0.81
CTCFL-220ENST00000608858 PLXND1Q9Y4D7 1925 aa9.96□□□□□ -0.81
CTCFL-220ENST00000608858 FLRT2O43155 660 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 NEMFO60524 1076 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 HIP1RO75146 1068 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 CER1O95813 267 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 NFICP08651 508 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 CLTAP09496 248 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 ADH5P11766 374 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 NCAM1P13591 858 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 CYP3A5P20815 502 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 ADSSP30520 456 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 MCM7P33993 719 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 CSRP3P50461 194 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 DNAJC3Q13217 504 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 NOLC1Q14978 699 aaKnown RBP eCLIP9.96□□□□□ -0.82
CTCFL-220ENST00000608858 KIF19Q2TAC6 998 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 HSF5Q4G112 596 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-220ENST00000608858 JADE1Q6IE81 842 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 SDE2Q6IQ49 451 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 LAYNQ6UX15 382 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 CHPFQ8IZ52 775 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 DAW1Q8N136 415 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 C2orf15Q8WU43 125 aaKnown RBP9.96□□□□□ -0.82
CTCFL-220ENST00000608858 TMEM176AQ96HP8 235 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 ZFRQ96KR1 1074 aaKnown RBP9.96□□□□□ -0.82
CTCFL-220ENST00000608858 PLEKHA5Q9HAU0 1116 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 CFAP97Q9P2B7 532 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 UXTQ9UBK9 157 aaPredicted RBP9.96□□□□□ -0.82
CTCFL-220ENST00000608858 GTF3C4Q9UKN8 822 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 ARHGAP26Q9UNA1 814 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 KIAA1024Q9UPX6 916 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 CPQQ9Y646 472 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 COL6A6A6NMZ7 2263 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 PTPN13Q12923 2485 aa9.96□□□□□ -0.82
CTCFL-220ENST00000608858 TEP1Q99973 2627 aaKnown RBP9.95□□□□□ -0.82
CTCFL-220ENST00000608858 E9PMD0 336 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 PIRO00625 290 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 HCRTO43612 131 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 BRINP1O60477 761 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 TOM1L1O75674 476 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 NOL4O94818 638 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 CYP11A1P05108 521 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 CD6P30203 668 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 NFKB2Q00653 900 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 PPP2R3AQ06190 1150 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 STRN3Q13033 797 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 AAMPQ13685 434 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 TOB2Q14106 344 aaPredicted RBP9.95□□□□□ -0.82
CTCFL-220ENST00000608858 ENOX2Q16206 610 aaKnown RBP9.95□□□□□ -0.82
CTCFL-220ENST00000608858 ANO4Q32M45 955 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 SPATA1Q5VX52 437 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 FAM124AQ86V42 546 aa9.95□□□□□ -0.82
CTCFL-220ENST00000608858 SKAP1Q86WV1 359 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms