RNA–Protein interactions for RNA: ENST00000607632.1

PRDM16-210, Transcript of PR/SET domain 16, humanhuman

TSL 2

Gene PRDM16, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-210ENST00000607632 NELL2Q99435 816 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 FAM83CQ9BQN1 747 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 FOXQ1Q9C009 403 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 SMG9Q9H0W8 520 aaKnown RBP15.19■□□□□ 0.02
PRDM16-210ENST00000607632 KRT82Q9NSB4 513 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 TRPM5Q9NZQ8 1165 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 ARHGAP26Q9UNA1 814 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 SIT1Q9Y3P8 196 aa15.19■□□□□ 0.02
PRDM16-210ENST00000607632 TRAV19A0A0A6YYK7 116 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 C2orf78A6NCI8 922 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 MAN2B1O00754 1011 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 DPYSL4O14531 572 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 USP17L7P0C7H9 530 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 FAM200BP0CF97 657 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 CD58P19256 250 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 TRIM21P19474 475 aaKnown RBP15.18■□□□□ 0.02
PRDM16-210ENST00000607632 TBXAS1P24557 533 aaPredicted RBP15.18■□□□□ 0.02
PRDM16-210ENST00000607632 YWHAQP27348 245 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 PDE6CP51160 858 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 SLC7A9P82251 487 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 KCNH2Q12809 1159 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 TAF10Q12962 218 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 C1orf228Q6PIY5 440 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 DTWD2Q8NBA8 298 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 GPT2Q8TD30 523 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 CLDN23Q96B33 292 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 TMEM176AQ96HP8 235 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 SLITRK1Q96PX8 696 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 MED10Q9BTT4 135 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 FAM49BQ9NUQ9 324 aa15.18■□□□□ 0.02
PRDM16-210ENST00000607632 CCDC192P0DO97 292 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 ACO1P21399 889 aaKnown RBP15.17■□□□□ 0.02
PRDM16-210ENST00000607632 TARSP26639 723 aaKnown RBP15.17■□□□□ 0.02
PRDM16-210ENST00000607632 ERCC5P28715 1186 aaPredicted RBP15.17■□□□□ 0.02
PRDM16-210ENST00000607632 MAGEA9P43362 315 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 TUBP50607 506 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 ZXDBP98169 803 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 NHLH1Q02575 133 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 DPCR1Q3MIW9 517 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 CT47A1Q5JQC4 288 aaPredicted RBP15.17■□□□□ 0.02
PRDM16-210ENST00000607632 PPP1R26Q5T8A7 1209 aaPredicted RBP15.17■□□□□ 0.02
PRDM16-210ENST00000607632 ZNF852Q6ZMS4 543 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 GPIHBP1Q8IV16 184 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 YAF2Q8IY57 180 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 ARL14EPQ8N8R7 260 aaPredicted RBP15.17■□□□□ 0.02
PRDM16-210ENST00000607632 SCAMP5Q8TAC9 235 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 CYP2S1Q96SQ9 504 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 DNAI2Q9GZS0 605 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 IRF2BPLQ9H1B7 796 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 C8orf33Q9H7E9 229 aaPredicted RBP15.17■□□□□ 0.02
PRDM16-210ENST00000607632 HPS4Q9NQG7 708 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 MTF2Q9Y483 593 aaPredicted RBP15.17■□□□□ 0.02
PRDM16-210ENST00000607632 PIAS3Q9Y6X2 628 aa15.17■□□□□ 0.02
PRDM16-210ENST00000607632 MYO16Q9Y6X6 1858 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 AFPP02771 609 aaKnown RBP15.16■□□□□ 0.02
PRDM16-210ENST00000607632 CKMP06732 381 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 HDCP19113 662 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 RPS9P46781 194 aaKnown RBP15.16■□□□□ 0.02
PRDM16-210ENST00000607632 MAP3K7CLP57077 242 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 YWHAEP62258 255 aaKnown RBP15.16■□□□□ 0.02
PRDM16-210ENST00000607632 GCNT1Q02742 428 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 MTF1Q14872 753 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 SMYD5Q6GMV2 418 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 EHBP1Q8NDI1 1231 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 CSGALNACT1Q8TDX6 532 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 FBXO32Q969P5 355 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 ZFYVE19Q96K21 471 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 CNOT6LQ96LI5 555 aaKnown RBP15.16■□□□□ 0.02
PRDM16-210ENST00000607632 NT5C1BQ96P26 610 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 DUSP16Q9BY84 665 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 UBXN6Q9BZV1 441 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 RNF38Q9H0F5 515 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 FBXO44Q9H4M3 255 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 TRPC7Q9HCX4 862 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 THG1LQ9NWX6 298 aaKnown RBP15.16■□□□□ 0.02
PRDM16-210ENST00000607632 MRPS17Q9Y2R5 130 aaKnown RBP15.16■□□□□ 0.02
PRDM16-210ENST00000607632 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.16■□□□□ 0.02
PRDM16-210ENST00000607632 USP3Q9Y6I4 520 aa15.16■□□□□ 0.02
PRDM16-210ENST00000607632 FAM170BA6NMN3 283 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 DCNP07585 359 aaKnown RBP15.15■□□□□ 0.02
PRDM16-210ENST00000607632 CD72P21854 359 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 ADORA2BP29275 332 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 CTHP32929 405 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 CETN1Q12798 172 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 ZNF394Q53GI3 561 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 GPRIN1Q7Z2K8 1008 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 RALGPS2Q86X27 583 aaPredicted RBP15.15■□□□□ 0.02
PRDM16-210ENST00000607632 CHFRQ96EP1 664 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 GKN1Q9NS71 199 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 GTSE1Q9NYZ3 720 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 CNTN6Q9UQ52 1028 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 SCML2Q9UQR0 700 aa15.15■□□□□ 0.02
PRDM16-210ENST00000607632 GTPBP10A4D1E9 387 aaKnown RBP15.14■□□□□ 0.01
PRDM16-210ENST00000607632 SPECC1L-ADORA2AF8WAN1 911 aa15.14■□□□□ 0.01
PRDM16-210ENST00000607632 STK25O00506 426 aa15.14■□□□□ 0.01
PRDM16-210ENST00000607632 PAEPP09466 180 aa15.14■□□□□ 0.01
PRDM16-210ENST00000607632 RFX1P22670 979 aa15.14■□□□□ 0.01
PRDM16-210ENST00000607632 KIF11P52732 1056 aa15.14■□□□□ 0.01
PRDM16-210ENST00000607632 ZNF132P52740 706 aa15.14■□□□□ 0.01
PRDM16-210ENST00000607632 TNK2Q07912 1038 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms