RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 GCNT4Q9P109 453 aa17.54■□□□□ 0.4
LINC00240-203ENST00000606878 CHORDC1Q9UHD1 332 aaPredicted RBP17.54■□□□□ 0.4
LINC00240-203ENST00000606878 MRPS17Q9Y2R5 130 aaKnown RBP17.54■□□□□ 0.4
LINC00240-203ENST00000606878 C2orf78A6NCI8 922 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 FAM170BA6NMN3 283 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 TNFRSF10BO14763 440 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 BEST1O76090 585 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 SLC5A3P53794 718 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 MLLT6P55198 1093 aaPredicted RBP17.53■□□□□ 0.4
LINC00240-203ENST00000606878 DPCR1Q3MIW9 517 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 FAM114A1Q8IWE2 563 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 SLC4A11Q8NBS3 891 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 ZMIZ2Q8NF64 920 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 LMO3Q8TAP4 145 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 OVCA2Q8WZ82 227 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 DUSP16Q9BY84 665 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 OSBPL6Q9BZF3 934 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 KIAA1257Q9ULG3 409 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 CCL26Q9Y258 94 aa17.53■□□□□ 0.4
LINC00240-203ENST00000606878 CACNA1HO95180 2353 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 NCAM2O15394 837 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 MBD3O95983 291 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 CD72P21854 359 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 KPNA1P52294 538 aaPredicted RBP17.52■□□□□ 0.4
LINC00240-203ENST00000606878 SLC8A3P57103 927 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 UBXN2BQ14CS0 331 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 PPP1R26Q5T8A7 1209 aaPredicted RBP17.52■□□□□ 0.4
LINC00240-203ENST00000606878 CLEC20AQ6ZU45 233 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 IRF2BP1Q8IU81 584 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 PPM1KQ8N3J5 372 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 ZFYVE19Q96K21 471 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 CNOT6LQ96LI5 555 aaKnown RBP17.52■□□□□ 0.4
LINC00240-203ENST00000606878 SLC22A12Q96S37 553 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 FOXQ1Q9C009 403 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 IRF2BPLQ9H1B7 796 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 THAP9Q9H5L6 903 aa17.52■□□□□ 0.4
LINC00240-203ENST00000606878 C8orf33Q9H7E9 229 aaPredicted RBP17.52■□□□□ 0.4
LINC00240-203ENST00000606878 NCANO14594 1321 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 ARNTLO00327 626 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 GALR2O43603 387 aaPredicted RBP17.51■□□□□ 0.39
LINC00240-203ENST00000606878 MTIF2P46199 727 aaKnown RBP17.51■□□□□ 0.39
LINC00240-203ENST00000606878 ARHGAP17Q68EM7 881 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 C1orf228Q6PIY5 440 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 DTWD2Q8NBA8 298 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 PJA1Q8NG27 643 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 FAM83CQ9BQN1 747 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 UBXN6Q9BZV1 441 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 RNF38Q9H0F5 515 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 PNPLA8Q9NP80 782 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 LTB4R2Q9NPC1 389 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 ARHGAP26Q9UNA1 814 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 PCDHB4Q9Y5E5 795 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 PIAS3Q9Y6X2 628 aa17.51■□□□□ 0.39
LINC00240-203ENST00000606878 FAM92AA1XBS5 289 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 DCNP07585 359 aaKnown RBP17.5■□□□□ 0.39
LINC00240-203ENST00000606878 VDRP11473 427 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 CD19P15391 556 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 ACO1P21399 889 aaKnown RBP17.5■□□□□ 0.39
LINC00240-203ENST00000606878 PTPN5P54829 565 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 SLC7A9P82251 487 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 PDGFRLQ15198 375 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 SGO2Q562F6 1265 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 HECTD3Q5T447 861 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 SNX30Q5VWJ9 437 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 TMEM270Q6UE05 265 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 SASS6Q6UVJ0 657 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 RRAGAQ7L523 313 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 ANKRD52Q8NB46 1076 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 TTC16Q8NEE8 873 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 SH3RF2Q8TEC5 729 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 FAM3CQ92520 227 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 JAKMIP2Q96AA8 810 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 MSANTD3Q96H12 275 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 INTS2Q9H0H0 1204 aaKnown RBP17.5■□□□□ 0.39
LINC00240-203ENST00000606878 TLR8Q9NR97 1041 aaKnown RBP17.5■□□□□ 0.39
LINC00240-203ENST00000606878 GTSE1Q9NYZ3 720 aa17.5■□□□□ 0.39
LINC00240-203ENST00000606878 PAEPP09466 180 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 GCNT1Q02742 428 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 MTF1Q14872 753 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 ITPRIPL2Q3MIP1 535 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 GBP6Q6ZN66 633 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 RBM43Q6ZSC3 357 aaKnown RBP17.49■□□□□ 0.39
LINC00240-203ENST00000606878 RALGPS2Q86X27 583 aaPredicted RBP17.49■□□□□ 0.39
LINC00240-203ENST00000606878 CCDC105Q8IYK2 499 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 UBR7Q8N806 425 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 TTC8Q8TAM2 541 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 FAM81BQ96LP2 452 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 CRACR2AQ9BSW2 395 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 UBE2TQ9NPD8 197 aaPredicted RBP17.49■□□□□ 0.39
LINC00240-203ENST00000606878 DUS2Q9NX74 493 aaKnown RBP17.49■□□□□ 0.39
LINC00240-203ENST00000606878 GMIPQ9P107 970 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 HESX1Q9UBX0 185 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 SCML2Q9UQR0 700 aa17.49■□□□□ 0.39
LINC00240-203ENST00000606878 MTF2Q9Y483 593 aaPredicted RBP17.49■□□□□ 0.39
LINC00240-203ENST00000606878 HHLA1C9JL84 531 aa17.48■□□□□ 0.39
LINC00240-203ENST00000606878 OAS1P00973 400 aaKnown RBP17.48■□□□□ 0.39
LINC00240-203ENST00000606878 ZDHHC11BP0C7U3 371 aa17.48■□□□□ 0.39
LINC00240-203ENST00000606878 MBL2P11226 248 aaPredicted RBP17.48■□□□□ 0.39
LINC00240-203ENST00000606878 TCF3P15923 654 aa17.48■□□□□ 0.39
LINC00240-203ENST00000606878 TUBP50607 506 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms