RNA–Protein interactions for RNA: ENST00000606749.1

CUX1-219, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-219ENST00000606749 KIAA1958Q8N8K9 716 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 GAB3Q8WWW8 586 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 CD101Q93033 1021 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 ELMO3Q96BJ8 720 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 KCNK16Q96T55 309 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 RTKNQ9BST9 563 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 ELOVL4Q9GZR5 314 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 KCTD10Q9H3F6 313 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 SMYD3Q9H7B4 428 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 SEMA4GQ9NTN9 838 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 EXOC1Q9NV70 894 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 USP25Q9UHP3 1055 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 CDV3Q9UKY7 258 aaKnown RBP8.11□□□□□ -1.11
CUX1-219ENST00000606749 ZDHHC9Q9Y397 364 aa8.11□□□□□ -1.11
CUX1-219ENST00000606749 DCDC2BA2VCK2 349 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 K7EQS6 105 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 PDXKO00764 312 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 TNFRSF10BO14763 440 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 AXIN1O15169 862 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 RPP40O75818 363 aaKnown RBP8.1□□□□□ -1.11
CUX1-219ENST00000606749 NFATC1O95644 943 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 RPN1P04843 607 aaKnown RBP8.1□□□□□ -1.11
CUX1-219ENST00000606749 MYL1P05976 194 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 PFKFB1P16118 471 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 YWHAQP27348 245 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 OPRD1P41143 372 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 RAP1GAPP47736 663 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 BIRC3Q13489 604 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 SGSM1Q2NKQ1 1148 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 GAB4Q2WGN9 574 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 ZNF699Q32M78 642 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 ZACNQ401N2 412 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 ZNF667Q5HYK9 610 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 PRR23CQ6ZRP0 262 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 SYT13Q7L8C5 426 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 CACNA2D4Q7Z3S7 1137 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 FILIP1Q7Z7B0 1213 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 KBTBD6Q86V97 674 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 RPLP0P6Q8NHW5 317 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 SCAMP5Q8TAC9 235 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 TMC2Q8TDI7 906 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 OVCA2Q8WZ82 227 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 LOXL4Q96JB6 756 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 CHAMP1Q96JM3 812 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 ZC3H10Q96K80 434 aaKnown RBP8.1□□□□□ -1.11
CUX1-219ENST00000606749 TNIP3Q96KP6 325 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 SLITRK1Q96PX8 696 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 SDCBP2Q9H190 292 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 SMPD4Q9NXE4 827 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 IL37Q9NZH6 218 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 EBF1Q9UH73 591 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 CHORDC1Q9UHD1 332 aaPredicted RBP8.1□□□□□ -1.11
CUX1-219ENST00000606749 HPSEQ9Y251 543 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 CPQQ9Y646 472 aa8.1□□□□□ -1.11
CUX1-219ENST00000606749 PTPRDP23468 1912 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 DNAH14Q0VDD8 3507 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.09□□□□□ -1.11
CUX1-219ENST00000606749 ANTXRLA6NF34 631 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 SLC9A3R1O14745 358 aaPredicted RBP8.09□□□□□ -1.11
CUX1-219ENST00000606749 IKBKBO14920 756 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 GDF9O60383 454 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 RTN3O95197 1032 aaPredicted RBP8.09□□□□□ -1.11
CUX1-219ENST00000606749 NR3C1P04150 777 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 CCDC192P0DO97 292 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 MBL2P11226 248 aaPredicted RBP8.09□□□□□ -1.11
CUX1-219ENST00000606749 SYKP43405 635 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 NDUFA8P51970 172 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 IFRD2Q12894 506 aaPredicted RBP8.09□□□□□ -1.11
CUX1-219ENST00000606749 DMC1Q14565 340 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 DHCR24Q15392 516 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 C1orf220Q5T0J3 134 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 SNX30Q5VWJ9 437 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 CEP135Q66GS9 1140 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 RHBDF2Q6PJF5 856 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 SV2AQ7L0J3 742 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 ACOT1Q86TX2 421 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 CRYBG2Q8N1P7 616 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 CCDC26Q8TAB7 109 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 NETO1Q8TDF5 533 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 USP33Q8TEY7 942 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 FBXO32Q969P5 355 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 SPATA32Q96LK8 384 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 HHIPQ96QV1 700 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 MED10Q9BTT4 135 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 ARRDC1-AS1Q9H2J1 176 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 COMMD8Q9NX08 183 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 CFAP97Q9P2B7 532 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 TRAF3IP3Q9Y228 551 aa8.09□□□□□ -1.11
CUX1-219ENST00000606749 ATP8B3O60423 1300 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 A0A0A0MRY4 1105 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 FAM237AA0A1B0GTK4 181 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 E2F8A0AVK6 867 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 FAM92AA1XBS5 289 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 SCAMP3O14828 347 aaKnown RBP8.08□□□□□ -1.12
CUX1-219ENST00000606749 SLC30A4O14863 429 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 MAPK13O15264 365 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 COCHO43405 550 aa8.08□□□□□ -1.12
CUX1-219ENST00000606749 CALUO43852 315 aaPredicted RBP8.08□□□□□ -1.12
CUX1-219ENST00000606749 FOXD2O60548 495 aaPredicted RBP8.08□□□□□ -1.12
CUX1-219ENST00000606749 AP1G2O75843 785 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms