RNA–Protein interactions for RNA: ENST00000604817.2

IGHV3-29-201, Transcript of immunoglobulin heavy variable 3-29 (pseudogene), humanhuman

BASIC

Gene IGHV3-29, Length 344 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-29-201ENST00000604817 KLHL14Q9P2G3 628 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 HERC5Q9UII4 1024 aaKnown RBP4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 VPS28Q9UK41 221 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 SNX5Q9Y5X3 404 aa4.36□□□□□ -1.71
IGHV3-29-201ENST00000604817 PHRF1Q9P1Y6 1649 aaKnown RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 LMO7Q8WWI1 1683 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 A0A087WZ62 844 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 CCDC196A0A1B0GTZ2 297 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 NT5C1B-RDH14C9J2C7 533 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 THAP12O43422 761 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 OPHN1O60890 802 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 MAFO75444 373 aaPredicted RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 STARD3NLO95772 234 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 PTMAP06454 111 aaKnown RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 MTHFD1P11586 935 aaKnown RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 IL1R1P14778 569 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 PFKLP17858 780 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 MALP21145 153 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 SDHBP21912 280 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 MAPK4P31152 587 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 CTNNA1P35221 906 aaKnown RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 KCNC1P48547 511 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 MMP14P50281 582 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 PRKAA2P54646 552 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 NKX3-2P78367 333 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 ROM1Q03395 351 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 TLE1Q04724 770 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 FSTL1Q12841 308 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 CDC16Q13042 620 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 CUL4AQ13619 759 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 UBXN11Q5T124 520 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 NUGGCQ68CJ6 796 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 RPUSD3Q6P087 351 aaKnown RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 UNC13DQ70J99 1090 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 TEX11Q8IYF3 940 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 HIPK4Q8NE63 616 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 GPR156Q8NFN8 814 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 AFAP1L1Q8TED9 768 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 ALG3Q92685 438 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 NEIL1Q96FI4 390 aaPredicted RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 TIGD1Q96MW7 591 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 TWNKQ96RR1 684 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 GPR20Q99678 358 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 FDXACB1Q9BRP7 624 aaPredicted RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 TXLNGYQ9BZA5 131 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 KIAA1683Q9H0B3 1180 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 PABPC3Q9H361 631 aaKnown RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 WDCPQ9H6R7 721 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 TDP1Q9NUW8 608 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 FEZ2Q9UHY8 353 aaPredicted RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 ARHGAP26Q9UNA1 814 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 CNPY2Q9Y2B0 182 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 SIT1Q9Y3P8 196 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 PCDHB6Q9Y5E3 794 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 PCDHA5Q9Y5H7 936 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 PNPLA7Q6ZV29 1317 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 WDR17Q8IZU2 1322 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 POLR3AO14802 1390 aaPredicted RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 ADCY9O60503 1353 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 BRD4O60885 1362 aaPredicted RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 COL5A2P05997 1499 aaPredicted RBP4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 TULP4Q9NRJ4 1543 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 QSER1Q2KHR3 1735 aa4.35□□□□□ -1.71
IGHV3-29-201ENST00000604817 A0A0A6YYJ9 748 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 SMTNL1A8MU46 457 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 ASNA1O43681 348 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 MPIG6BO95866 241 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 ENO2P09104 434 aaPredicted RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 CSF1P09603 554 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 HNRNPA1P09651 372 aaKnown RBP eCLIP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 GYS1P13807 737 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 PORP16435 677 aaPredicted RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 HDCP19113 662 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 IL11P20809 199 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 PTGS1P23219 599 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 HMGB2P26583 209 aaKnown RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 PRDX5P30044 214 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 ATICP31939 592 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 POLE2P56282 527 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 PLIN5Q00G26 463 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 MAP3K12Q12852 859 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 SLC12A1Q13621 1099 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 TARBP2Q15633 366 aaKnown RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 SMAD1Q15797 465 aaKnown RBP4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 ATP2B3Q16720 1220 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 CCDC178Q5BJE1 867 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 RILPL1Q5EBL4 403 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 MAP3K21Q5TCX8 1036 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 CD276Q5ZPR3 534 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 SLC30A6Q6NXT4 461 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 KLHL17Q6TDP4 642 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 TEPPQ6URK8 271 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 USP49Q70CQ1 688 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 B4GALNT4Q76KP1 1039 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 RNF44Q7L0R7 432 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 FAM90A1Q86YD7 464 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 NGEFQ8N5V2 710 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 CDYL2Q8N8U2 506 aa4.34□□□□□ -1.71
IGHV3-29-201ENST00000604817 OR6B3Q8NGW1 331 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms