RNA–Protein interactions for RNA: ENST00000602784.1

RNF40-212, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 991 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-212ENST00000602784 GJD3Q8N144 294 aa14.66□□□□□ -0.06
RNF40-212ENST00000602784 SCAMP5Q8TAC9 235 aa14.66□□□□□ -0.06
RNF40-212ENST00000602784 SLC35F5Q8WV83 523 aa14.66□□□□□ -0.06
RNF40-212ENST00000602784 NXPE3Q969Y0 559 aa14.66□□□□□ -0.06
RNF40-212ENST00000602784 SLITRK1Q96PX8 696 aa14.66□□□□□ -0.06
RNF40-212ENST00000602784 UHRF1Q96T88 793 aaPredicted RBP14.66□□□□□ -0.06
RNF40-212ENST00000602784 EDEM3Q9BZQ6 932 aa14.66□□□□□ -0.06
RNF40-212ENST00000602784 ATXN3LQ9H3M9 355 aa14.66□□□□□ -0.06
RNF40-212ENST00000602784 MYH10P35580 1976 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 ANHXE9PGG2 379 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 NRG2O14511 850 aaPredicted RBP14.65□□□□□ -0.06
RNF40-212ENST00000602784 THAP12O43422 761 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 CBFA2T2O43439 604 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 PFKLP17858 780 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 SOX5P35711 763 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 STAT1P42224 750 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 PLA2G4AP47712 749 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 KIF11P52732 1056 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 PDE4CQ08493 712 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 TEAD2Q15562 447 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 RAB41Q5JT25 222 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 SNX30Q5VWJ9 437 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 PIGZQ86VD9 579 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 MON1AQ86VX9 555 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 FMNL3Q8IVF7 1028 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 STKLD1Q8NE28 680 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 PDZD8Q8NEN9 1154 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 STK32AQ8WU08 396 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 ING5Q8WYH8 240 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 KCTD13Q8WZ19 329 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 MRPS31Q92665 395 aaKnown RBP14.65□□□□□ -0.06
RNF40-212ENST00000602784 IQCDQ96DY2 449 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 SPAG5Q96R06 1193 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 NUP58Q9BVL2 599 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 LHX5Q9H2C1 402 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 TASP1Q9H6P5 420 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 TRPV4Q9HBA0 871 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 NLRC4Q9NPP4 1024 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 TRPM5Q9NZQ8 1165 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 IFNKQ9P0W0 207 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 PCDHGC3Q9UN70 934 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 SCML2Q9UQR0 700 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 USP3Q9Y6I4 520 aa14.65□□□□□ -0.06
RNF40-212ENST00000602784 PATJQ8NI35 1801 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 ZNF840PA6NDX5 716 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 TADA3O75528 432 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 CALCAP01258 141 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 PNMA6AP0CW24 399 aaPredicted RBP14.64□□□□□ -0.07
RNF40-212ENST00000602784 CYP11B1P15538 503 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 GJA1P17302 382 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 GPD2P43304 727 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 RPL34P49207 117 aaKnown RBP14.64□□□□□ -0.07
RNF40-212ENST00000602784 TAF10Q12962 218 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 MTSS1LQ765P7 747 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 CCDC186Q7Z3E2 898 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 CACNA2D4Q7Z3S7 1137 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 SLC47A2Q86VL8 602 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 UBA3Q8TBC4 463 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 FBXO32Q969P5 355 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 MCRS1Q96EZ8 462 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 HSFY1Q96LI6 401 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 XPO4Q9C0E2 1151 aaKnown RBP14.64□□□□□ -0.07
RNF40-212ENST00000602784 ACP6Q9NPH0 428 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 IGSF9Q9P2J2 1179 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 LIMD1Q9UGP4 676 aa14.64□□□□□ -0.07
RNF40-212ENST00000602784 ZNF638Q14966 1978 aaKnown RBP14.64□□□□□ -0.07
RNF40-212ENST00000602784 DENND4CQ5VZ89 1909 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 M0QYV0 167 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 ZDHHC11BP0C7U3 371 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 CCDC172P0C7W6 258 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 SP100P23497 879 aaPredicted RBP14.63□□□□□ -0.07
RNF40-212ENST00000602784 SSTR3P32745 418 aaPredicted RBP14.63□□□□□ -0.07
RNF40-212ENST00000602784 KRT9P35527 623 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 PDE6CP51160 858 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 HTR4Q13639 388 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 GPR158Q5T848 1215 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 PM20D1Q6GTS8 502 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 POTEHQ6S545 545 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 SARM1Q6SZW1 724 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 GPRIN1Q7Z2K8 1008 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 ZNF677Q86XU0 584 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 SCML4Q8N228 414 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 SMARCD2Q92925 531 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 SECISBP2LQ93073 1101 aaKnown RBP14.63□□□□□ -0.07
RNF40-212ENST00000602784 E2F7Q96AV8 911 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 ZSWIM3Q96MP5 696 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 ASB16Q96NS5 453 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 NECAB3Q96P71 396 aaPredicted RBP14.63□□□□□ -0.07
RNF40-212ENST00000602784 SLC46A2Q9BY10 475 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 TTYH3Q9C0H2 523 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 CD320Q9NPF0 282 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 CYLDQ9NQC7 956 aa14.63□□□□□ -0.07
RNF40-212ENST00000602784 A0A1W2PQJ5 194 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 TULP2O00295 520 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 GFPT2O94808 682 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 PSEN1P49768 467 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 TUBP50607 506 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 TKTL1P51854 596 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 FAM78AQ5JUQ0 283 aa14.62□□□□□ -0.07
RNF40-212ENST00000602784 STXBP5Q5T5C0 1151 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms