RNA–Protein interactions for RNA: ENST00000602726.1

PPFIA3-208, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-208ENST00000602726 SHISA7A6NL88 538 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 PFKLP17858 780 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 MAGEA9P43362 315 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 SLC5A3P53794 718 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 MAP3K7CLP57077 242 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 TNK2Q07912 1038 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 ZNF394Q53GI3 561 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 C1orf228Q6PIY5 440 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 PDZD8Q8NEN9 1154 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 SCAMP5Q8TAC9 235 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 WHAMMQ8TF30 809 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 FBXO32Q969P5 355 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 CYFIP2Q96F07 1278 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 HNRNPABQ99729 332 aaKnown RBP23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 SMOQ99835 787 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 COL4A2P08572 1712 aa23.19■■□□□ 1.3
PPFIA3-208ENST00000602726 MYH10P35580 1976 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 TNFRSF10BO14763 440 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 GNA14O95837 355 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 SOX9P48436 509 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 FMO5P49326 533 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 ITPRIPL2Q3MIP1 535 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 C1orf210Q8IVY1 113 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 CLDN23Q96B33 292 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 HEXIM2Q96MH2 286 aaKnown RBP23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 ARID3AQ99856 593 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 FAM83CQ9BQN1 747 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 FAM124BQ9H5Z6 455 aaPredicted RBP23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 CSNK1G1Q9HCP0 422 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 COMMD8Q9NX08 183 aa23.18■■□□□ 1.3
PPFIA3-208ENST00000602726 SPECC1L-ADORA2AF8WAN1 911 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 BEST1O76090 585 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 FGFR1OPO95684 399 aaKnown RBP23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 CETN1Q12798 172 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 MTF1Q14872 753 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 CLEC17AQ6ZS10 378 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 RALGPS2Q86X27 583 aaPredicted RBP23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 ZMIZ2Q8NF64 920 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 RIN3Q8TB24 985 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 SH3RF2Q8TEC5 729 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 OVCA2Q8WZ82 227 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 SRRTQ9BXP5 876 aaKnown RBP23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 CLSTN2Q9H4D0 955 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 SPATA6Q9NWH7 488 aaPredicted RBP23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 CHORDC1Q9UHD1 332 aaPredicted RBP23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 ARHGAP26Q9UNA1 814 aa23.17■■□□□ 1.3
PPFIA3-208ENST00000602726 CACNA1IQ9P0X4 2223 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 RPS9P46781 194 aaKnown RBP23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 LRMPQ12912 555 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 CUL2Q13617 745 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 PDGFRLQ15198 375 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 ZNF77Q15935 545 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 TRIM68Q6AZZ1 485 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 TMEM176AQ96HP8 235 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 PHOX2BQ99453 314 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 EBF3Q9H4W6 596 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 IL37Q9NZH6 218 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 RWDD2AQ9UIY3 292 aa23.16■■□□□ 1.3
PPFIA3-208ENST00000602726 PMM2O15305 246 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 CTHP32929 405 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 YWHAEP62258 255 aaKnown RBP23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 USP4Q13107 963 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 FZD5Q13467 585 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 RUNX3Q13761 415 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 CLEC20AQ6ZU45 233 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 ZNF687Q8N1G0 1237 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 JAKMIP2Q96AA8 810 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 RNF38Q9H0F5 515 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 FBXO44Q9H4M3 255 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 LMAN1LQ9HAT1 526 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 HPS4Q9NQG7 708 aa23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 DUS2Q9NX74 493 aaKnown RBP23.15■■□□□ 1.3
PPFIA3-208ENST00000602726 OAS1P00973 400 aaKnown RBP23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 CCDC192P0DO97 292 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 TCF3P15923 654 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 TBXAS1P24557 533 aaPredicted RBP23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 IFNAR2P48551 515 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 RAD23BP54727 409 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 SLC7A9P82251 487 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 PPP1R26Q5T8A7 1209 aaPredicted RBP23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 ALYREFQ86V81 257 aaKnown RBP23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 TRIM59Q8IWR1 403 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 MLKLQ8NB16 471 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 SLC4A11Q8NBS3 891 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 OSCP1Q8WVF1 389 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 GMIPQ9P107 970 aa23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.14■■□□□ 1.29
PPFIA3-208ENST00000602726 KIF26AQ9ULI4 1882 aaPredicted RBP23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 FAM92AA1XBS5 289 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 LEFTY2O00292 366 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 P4HA2O15460 535 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 LAMTOR5O43504 91 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 OLFM2O95897 454 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 ARSAP15289 507 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 HOXD11P31277 338 aaPredicted RBP23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 MRE11P49959 708 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 MARSP56192 900 aaKnown RBP23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 KCNH2Q12809 1159 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 HECTD3Q5T447 861 aa23.13■■□□□ 1.29
PPFIA3-208ENST00000602726 TXNDC11Q6PKC3 985 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms