RNA–Protein interactions for RNA: ENST00000602574.5

COMMD3-215, Transcript of COMM domain containing 3, humanhuman

TSL 1 (best)

Gene COMMD3, Length 2,290 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-215ENST00000602574 TRMT5Q32P41 509 aaKnown RBP9.21□□□□□ -0.93
COMMD3-215ENST00000602574 GSTA5Q7RTV2 222 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 TMC3Q7Z5M5 1100 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 ANKLE2Q86XL3 938 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 HPS6Q86YV9 775 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 LRRC47Q8N1G4 583 aaKnown RBP9.21□□□□□ -0.93
COMMD3-215ENST00000602574 NEDD1Q8NHV4 660 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 SEPT8Q92599 483 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 LRRC37BQ96QE4 947 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 KRT12Q99456 494 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 TXLNGYQ9BZA5 131 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 SP110Q9HB58 689 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 TIGARQ9NQ88 270 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 MALT1Q9UDY8 824 aa9.21□□□□□ -0.93
COMMD3-215ENST00000602574 DIMT1Q9UNQ2 313 aaKnown RBP9.21□□□□□ -0.93
COMMD3-215ENST00000602574 WBP11Q9Y2W2 641 aaKnown RBP9.21□□□□□ -0.93
COMMD3-215ENST00000602574 A0A1B0GWJ7 208 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 MAGEC1O60732 1142 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 CLN5O75503 358 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 MYO1DO94832 1006 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 CDK14O94921 469 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 BAG2O95816 211 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 P4HBP07237 508 aaKnown RBP9.21□□□□□ -0.94
COMMD3-215ENST00000602574 PIP4K2AP48426 406 aaPredicted RBP9.21□□□□□ -0.94
COMMD3-215ENST00000602574 GDI2P50395 445 aaKnown RBP9.21□□□□□ -0.94
COMMD3-215ENST00000602574 ACY1Q03154 408 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 ATP1A4Q13733 1029 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 KRT32Q14532 448 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 SNX17Q15036 470 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 CYP2A13Q16696 494 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 CDKAL1Q5VV42 579 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 SCARA3Q6AZY7 606 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 KSR2Q6VAB6 950 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 MILR1Q7Z6M3 343 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 RASSF3Q86WH2 238 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 STX12Q86Y82 276 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 CAMK1DQ8IU85 385 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 SLC44A2Q8IWA5 706 aaPredicted RBP9.21□□□□□ -0.94
COMMD3-215ENST00000602574 NKAIN3Q8N8D7 197 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 KCT2Q8NC54 265 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 OR7D4Q8NG98 312 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 NCOA7Q8NI08 942 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF398Q8TD17 642 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF606Q8WXB4 792 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 DACT3Q96B18 629 aaPredicted RBP9.21□□□□□ -0.94
COMMD3-215ENST00000602574 OMA1Q96E52 524 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF578Q96N58 590 aaPredicted RBP9.21□□□□□ -0.94
COMMD3-215ENST00000602574 TBCBQ99426 244 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 PIP5K1AQ99755 562 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 SLC29A1Q99808 456 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 BTBD10Q9BSF8 475 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 TARS2Q9BW92 718 aaKnown RBP9.21□□□□□ -0.94
COMMD3-215ENST00000602574 HEMGNQ9BXL5 484 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 SLA2Q9H6Q3 261 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 RC3H2Q9HBD1 1191 aaKnown RBP9.21□□□□□ -0.94
COMMD3-215ENST00000602574 HAO1Q9UJM8 370 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 DTX4Q9Y2E6 619 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 PRKAB1Q9Y478 270 aa9.21□□□□□ -0.94
COMMD3-215ENST00000602574 POTEB3A0JP26 581 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 POTECB2RU33 542 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CFAP99D6REC4 459 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TAF4O00268 1085 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 MSI1O43347 362 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 GREM1O60565 184 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 ATG13O75143 517 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PFKFB1P16118 471 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 ITIH1P19827 911 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TARSP26639 723 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 SLC5A3P53794 718 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PPP2R5CQ13362 524 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 SNTA1Q13424 505 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TRPC3Q13507 836 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 SELPLGQ14242 412 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 GALNT3Q14435 633 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 VARS2Q5ST30 1063 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 MFSD5Q6N075 450 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 ERAP2Q6P179 960 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 POTEBQ6S5H4 581 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 EEPD1Q7L9B9 569 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 RALYLQ86SE5 291 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TSPYL5Q86VY4 417 aaPredicted RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 TEX19Q8NA77 164 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PSD4Q8NDX1 1056 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 OR2W6PQ8NHA6 318 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 SEC14L1Q92503 715 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 LRRC59Q96AG4 307 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 MTBPQ96DY7 904 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 PHF12Q96QT6 1004 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 NELL2Q99435 816 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 NOC4LQ9BVI4 516 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CADM1Q9BY67 442 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 STARD7Q9NQZ5 370 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CNTN3Q9P232 1028 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CNOT7Q9UIV1 285 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 GGT7Q9UJ14 662 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CPSF3Q9UKF6 684 aaKnown RBP9.2□□□□□ -0.94
COMMD3-215ENST00000602574 ZNF532Q9HCE3 1301 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 BCL9LQ86UU0 1499 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 A0A1B0GUL6 1792 aa9.2□□□□□ -0.94
COMMD3-215ENST00000602574 CYP3A7-CYP3A51PA0A087WV96 503 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms