RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 SYAP1Q96A49 352 aaPredicted RBP14.01□□□□□ -0.17
RPS28-204ENST00000602140 SLITRK1Q96PX8 696 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 B3GNT5Q9BYG0 378 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 ELOVL4Q9GZR5 314 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 XYLT2Q9H1B5 865 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 SMOC1Q9H4F8 434 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 FAM13BQ9NYF5 915 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 CGNQ9P2M7 1197 aaKnown RBP14.01□□□□□ -0.17
RPS28-204ENST00000602140 PCDHA7Q9UN72 937 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 CPQQ9Y646 472 aa14.01□□□□□ -0.17
RPS28-204ENST00000602140 PTPRDP23468 1912 aa14□□□□□ -0.17
RPS28-204ENST00000602140 HELZP42694 1942 aaKnown RBP14□□□□□ -0.17
RPS28-204ENST00000602140 ANTXRLA6NF34 631 aa14□□□□□ -0.17
RPS28-204ENST00000602140 K7EQS6 105 aa14□□□□□ -0.17
RPS28-204ENST00000602140 SCAMP3O14828 347 aaKnown RBP14□□□□□ -0.17
RPS28-204ENST00000602140 DCLK1O15075 740 aa14□□□□□ -0.17
RPS28-204ENST00000602140 OLFM2O95897 454 aa14□□□□□ -0.17
RPS28-204ENST00000602140 ZSCAN22P10073 491 aaPredicted RBP14□□□□□ -0.17
RPS28-204ENST00000602140 ATICP31939 592 aa14□□□□□ -0.17
RPS28-204ENST00000602140 MPLP40238 635 aa14□□□□□ -0.17
RPS28-204ENST00000602140 DGKEP52429 567 aa14□□□□□ -0.17
RPS28-204ENST00000602140 CDH8P55286 799 aa14□□□□□ -0.17
RPS28-204ENST00000602140 SEC13P55735 322 aa14□□□□□ -0.17
RPS28-204ENST00000602140 BIRC3Q13489 604 aa14□□□□□ -0.17
RPS28-204ENST00000602140 GAB4Q2WGN9 574 aa14□□□□□ -0.17
RPS28-204ENST00000602140 C2orf27AQ580R0 203 aa14□□□□□ -0.17
RPS28-204ENST00000602140 PLA2G2CQ5R387 149 aa14□□□□□ -0.17
RPS28-204ENST00000602140 RESP18Q5W5W9 173 aa14□□□□□ -0.17
RPS28-204ENST00000602140 GRAMD1CQ8IYS0 662 aa14□□□□□ -0.17
RPS28-204ENST00000602140 ADGRG2Q8IZP9 1017 aa14□□□□□ -0.17
RPS28-204ENST00000602140 CCDC26Q8TAB7 109 aa14□□□□□ -0.17
RPS28-204ENST00000602140 PLEKHO2Q8TD55 490 aa14□□□□□ -0.17
RPS28-204ENST00000602140 USP33Q8TEY7 942 aa14□□□□□ -0.17
RPS28-204ENST00000602140 SNX21Q969T3 373 aa14□□□□□ -0.17
RPS28-204ENST00000602140 DUSP15Q9H1R2 295 aaPredicted RBP14□□□□□ -0.17
RPS28-204ENST00000602140 SMYD3Q9H7B4 428 aa14□□□□□ -0.17
RPS28-204ENST00000602140 EBF1Q9UH73 591 aa14□□□□□ -0.17
RPS28-204ENST00000602140 PCDHGA5Q9Y5G8 931 aa14□□□□□ -0.17
RPS28-204ENST00000602140 CLSTN1O94985 981 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 F13A1P00488 732 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 OAS1P00973 400 aaKnown RBP13.99□□□□□ -0.17
RPS28-204ENST00000602140 CYP17A1P05093 508 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 YWHAQP27348 245 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 LIMK1P53667 647 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 DHCR24Q15392 516 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 ELF2Q15723 593 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 CEP57L1Q8IYX8 460 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 NUP93Q8N1F7 819 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 KIAA1958Q8N8K9 716 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 TSTD1Q8NFU3 115 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 DDX1Q92499 740 aaKnown RBP13.99□□□□□ -0.17
RPS28-204ENST00000602140 FBXO32Q969P5 355 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 ELMO3Q96BJ8 720 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 KCNK16Q96T55 309 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 CFAP97Q9P2B7 532 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 INVSQ9Y283 1065 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 EML5Q05BV3 1969 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 SDK1Q7Z5N4 2213 aa13.99□□□□□ -0.17
RPS28-204ENST00000602140 MYO16Q9Y6X6 1858 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 LRRIQ3A6PVS8 624 aaPredicted RBP13.98□□□□□ -0.17
RPS28-204ENST00000602140 SLC9A3R1O14745 358 aaPredicted RBP13.98□□□□□ -0.17
RPS28-204ENST00000602140 RHOBTB1O94844 696 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 RTN3O95197 1032 aaPredicted RBP13.98□□□□□ -0.17
RPS28-204ENST00000602140 HSP90AA1P07900 732 aaKnown RBP13.98□□□□□ -0.17
RPS28-204ENST00000602140 MBL2P11226 248 aaPredicted RBP13.98□□□□□ -0.17
RPS28-204ENST00000602140 PDIA4P13667 645 aaKnown RBP13.98□□□□□ -0.17
RPS28-204ENST00000602140 GBP1P32455 592 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 SLC6A11P48066 632 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 NCOA4Q13772 614 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 ZNF699Q32M78 642 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 ZNF667Q5HYK9 610 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 STPG1Q5TH74 334 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 SCARA5Q6ZMJ2 495 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 SFTPA1Q8IWL2 248 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 CCDC33Q8N5R6 958 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 PDZD8Q8NEN9 1154 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 GOLGA5Q8TBA6 731 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 PARD3BQ8TEW8 1205 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 MED10Q9BTT4 135 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 TPSD1Q9BZJ3 242 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 VRTNQ9H8Y1 702 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 VPS45Q9NRW7 570 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 CHORDC1Q9UHD1 332 aaPredicted RBP13.98□□□□□ -0.17
RPS28-204ENST00000602140 SERTAD1Q9UHV2 236 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 KIAA1549LQ6ZVL6 1849 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 LAMA1P25391 3075 aa13.98□□□□□ -0.17
RPS28-204ENST00000602140 ATP8B3O60423 1300 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 SPAG17Q6Q759 2223 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 TM4SF5O14894 197 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 COCHO43405 550 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 KLRC4O43908 158 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 C4BPAP04003 597 aaKnown RBP13.97□□□□□ -0.17
RPS28-204ENST00000602140 AP3M2P53677 418 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 CLDN10P78369 228 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 CREB5Q02930 508 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 DNM1Q05193 864 aaKnown RBP13.97□□□□□ -0.17
RPS28-204ENST00000602140 MESP2Q0VG99 397 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 STK4Q13043 487 aa13.97□□□□□ -0.17
RPS28-204ENST00000602140 USP39Q53GS9 565 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms