RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 TRIM67Q6ZTA4 783 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 MON1AQ86VX9 555 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 UBALD2Q8IYN6 164 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 CMTM8Q8IZV2 173 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 ANKRD52Q8NB46 1076 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 UBA3Q8TBC4 463 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 ACP6Q9NPH0 428 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 DNAJC12Q9UKB3 198 aa21.22■□□□□ 0.99
SSBP4-210ENST00000601444 ZNF840PA6NDX5 716 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 HEPACAM2A8MVW5 462 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 BECN2A8MW95 431 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 O00370 1275 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 RTN3O95197 1032 aaPredicted RBP21.21■□□□□ 0.99
SSBP4-210ENST00000601444 CFHP08603 1231 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 ENOSF1Q7L5Y1 443 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 FBXO32Q969P5 355 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 LSM14BQ9BX40 385 aaKnown RBP21.21■□□□□ 0.99
SSBP4-210ENST00000601444 EHD2Q9NZN4 543 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 TRPM5Q9NZQ8 1165 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 KIAA1257Q9ULG3 409 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 CCL26Q9Y258 94 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 NCOR1O75376 2440 aa21.21■□□□□ 0.99
SSBP4-210ENST00000601444 LRRC10BA6NIK2 292 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 ABL1P00519 1130 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 PNMA6AP0CW24 399 aaPredicted RBP21.2■□□□□ 0.98
SSBP4-210ENST00000601444 SRFP11831 508 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 USP8P40818 1118 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 PDE4CQ08493 712 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 SIGLEC14Q08ET2 396 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 IER5LQ5T953 404 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 KLHDC7AQ5VTJ3 777 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 ARL14EPQ8N8R7 260 aaPredicted RBP21.2■□□□□ 0.98
SSBP4-210ENST00000601444 ASIC4Q96FT7 647 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 SLITRK1Q96PX8 696 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 CBX8Q9HC52 389 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 GMIPQ9P107 970 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 FHOD1Q9Y613 1164 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 CUL9Q8IWT3 2517 aa21.2■□□□□ 0.98
SSBP4-210ENST00000601444 FAM92AA1XBS5 289 aa21.19■□□□□ 0.98
SSBP4-210ENST00000601444 SMTNL1A8MU46 457 aa21.19■□□□□ 0.98
SSBP4-210ENST00000601444 DDX6P26196 483 aaKnown RBP eCLIP21.19■□□□□ 0.98
SSBP4-210ENST00000601444 PKDCCQ504Y2 493 aa21.19■□□□□ 0.98
SSBP4-210ENST00000601444 PIGZQ86VD9 579 aa21.19■□□□□ 0.98
SSBP4-210ENST00000601444 SHC3Q92529 594 aa21.19■□□□□ 0.98
SSBP4-210ENST00000601444 USP13Q92995 863 aaPredicted RBP21.19■□□□□ 0.98
SSBP4-210ENST00000601444 RNF38Q9H0F5 515 aa21.19■□□□□ 0.98
SSBP4-210ENST00000601444 COMMD8Q9NX08 183 aa21.19■□□□□ 0.98
SSBP4-210ENST00000601444 OBSL1O75147 1896 aa21.19■□□□□ 0.98
SSBP4-210ENST00000601444 TMEM221A6NGB7 291 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 M0R296 226 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 FOXN3O00409 490 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-210ENST00000601444 PDGFBP01127 241 aaPredicted RBP21.18■□□□□ 0.98
SSBP4-210ENST00000601444 TPM2P07951 284 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 WEE1P30291 646 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 AVPR1AP37288 418 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 KIF11P52732 1056 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 CNGA2Q16280 664 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 LCLAT1Q6UWP7 414 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 LUZP1Q86V48 1076 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 MFSD6LQ8IWD5 586 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 ANKRD20A12PQ8NF67 263 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 RIN3Q8TB24 985 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 FAM81BQ96LP2 452 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 PNPLA8Q9NP80 782 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 HESX1Q9UBX0 185 aa21.18■□□□□ 0.98
SSBP4-210ENST00000601444 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.18■□□□□ 0.98
SSBP4-210ENST00000601444 TRAV19A0A0A6YYK7 116 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 SOBPA7XYQ1 873 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 LGALS16A8MUM7 142 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 CYP26A1O43174 497 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 PSMC3P17980 439 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 HDCP19113 662 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 PPP3CCP48454 512 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 BCAT1P54687 386 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 FKBP15Q5T1M5 1219 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 TRMT61BQ9BVS5 477 aaKnown RBP21.17■□□□□ 0.98
SSBP4-210ENST00000601444 NAA15Q9BXJ9 866 aaKnown RBP21.17■□□□□ 0.98
SSBP4-210ENST00000601444 UBXN6Q9BZV1 441 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 GANQ9H2C0 597 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 FBXO44Q9H4M3 255 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 SLC2A4RGQ9NR83 387 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 TDP1Q9NUW8 608 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 SIK3Q9Y2K2 1263 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 DENND4CQ5VZ89 1909 aa21.17■□□□□ 0.98
SSBP4-210ENST00000601444 M0QYV0 167 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 DPYSL4O14531 572 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 XPO1O14980 1071 aaKnown RBP21.16■□□□□ 0.98
SSBP4-210ENST00000601444 EPHB6O15197 1021 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 CKMP06732 381 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 USP17L7P0C7H9 530 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 ZDHHC11BP0C7U3 371 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 UCHL3P15374 230 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 GDI1P31150 447 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 ZXDBP98169 803 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 UBXN1Q04323 297 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 BST2Q10589 180 aaKnown RBP21.16■□□□□ 0.98
SSBP4-210ENST00000601444 RAPGEF1Q13905 1077 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 DRAP1Q14919 205 aaPredicted RBP21.16■□□□□ 0.98
SSBP4-210ENST00000601444 SYCP1Q15431 976 aa21.16■□□□□ 0.98
SSBP4-210ENST00000601444 RAB41Q5JT25 222 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms