RNA–Protein interactions for RNA: ENST00000600804.1

CHMP2A-207, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-207ENST00000600804 CA8P35219 290 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 RPL34P49207 117 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 TUFMP49411 452 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 CLCN4P51793 760 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 BCAT1P54687 386 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 ADKP55263 362 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 ORC1Q13415 861 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 SLC39A12Q504Y0 691 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 PPP1R26Q5T8A7 1209 aaPredicted RBP12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 WDR59Q6PJI9 974 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 NOP9Q86U38 636 aaKnown RBP12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 FAM35AQ86V20 835 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 TCEAL8Q8IYN2 117 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 SLC2A14Q8TDB8 520 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 STK32AQ8WU08 396 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 SMARCD1Q96GM5 515 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 DUSP16Q9BY84 665 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 ZNF518BQ9C0D4 1074 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 PLEKHA4Q9H4M7 779 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 CYLDQ9NQC7 956 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 TMLHEQ9NVH6 421 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 FBXW11Q9UKB1 542 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 TSPAN16Q9UKR8 245 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 USTQ9Y2C2 406 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 GREB1Q4ZG55 1949 aa12.32□□□□□ -0.44
CHMP2A-207ENST00000600804 ZNF638Q14966 1978 aaKnown RBP12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 THAP12O43422 761 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 TGM5O43548 720 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 NARSO43776 548 aaKnown RBP12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 GLUD1P00367 558 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 OR4Q2P0C623 313 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 FAM200BP0CF97 657 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 CCDC130P13994 396 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 CHRNB2P17787 502 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 AOC1P19801 751 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 BRD2P25440 801 aaKnown RBP12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 KLRC2P26717 231 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 CLCN5P51795 746 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 FMO1Q01740 532 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 KLHL30Q0D2K2 578 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 PPP1R2P3Q6NXS1 205 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 RNF19BQ6ZMZ0 732 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 GPR149Q86SP6 731 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 SPATA2LQ8IUW3 424 aaPredicted RBP12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 SPC24Q8NBT2 197 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 FLCNQ8NFG4 579 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 OLIG1Q8TAK6 271 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 SPATA17Q96L03 361 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 C8orf48Q96LL4 319 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 PPP1R9BQ96SB3 815 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 AGPAT1Q99943 283 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 RHOBTB2Q9BYZ6 727 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 ACP6Q9NPH0 428 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 DZANK1Q9NVP4 752 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 HESX1Q9UBX0 185 aa12.31□□□□□ -0.44
CHMP2A-207ENST00000600804 GPR179Q6PRD1 2367 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 EPG5Q9HCE0 2579 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 XPO1O14980 1071 aaKnown RBP12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 TRIM66O15016 1216 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 MICAL2O94851 1124 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CYP1A1P04798 512 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 HAPLN1P10915 354 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 GZMAP12544 262 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 HOXA9P31269 272 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 GPD2P43304 727 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 PLA2G4AP47712 749 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 SLC8A3P57103 927 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 RPL10AP62906 217 aaKnown RBP12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CYP27A1Q02318 531 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 ARID5AQ03989 594 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 ADCY1Q08828 1119 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CCDC173Q0VFZ6 552 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 BST2Q10589 180 aaKnown RBP12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CCDC142Q17RM4 750 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 ASTE1Q2TB18 679 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 ATAT1Q5SQI0 421 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 ELMSAN1Q6PJG2 1045 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CCDC149Q6ZUS6 474 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 ZNF571Q7Z3V5 609 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 VPS36Q86VN1 386 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 TTC30AQ86WT1 665 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 TMTC1Q8IUR5 882 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CCDC105Q8IYK2 499 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CCDC170Q8IYT3 715 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 ATAD1Q8NBU5 361 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CCDC112Q8NEF3 446 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 SLC30A5Q8TAD4 765 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 SLC35F5Q8WV83 523 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 HSFY1Q96LI6 401 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 KCNK12Q9HB15 430 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 DMAP1Q9NPF5 467 aaPredicted RBP12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 FAM49BQ9NUQ9 324 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 ARHGAP20Q9P2F6 1191 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 DUSP12Q9UNI6 340 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 CEP83Q9Y592 693 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 SPTBN2O15020 2390 aa12.3□□□□□ -0.44
CHMP2A-207ENST00000600804 AP1G2O75843 785 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 BDNFP23560 247 aa12.29□□□□□ -0.44
CHMP2A-207ENST00000600804 CYP2F1P24903 491 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms