RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ZCWPW1Q9H0M4 648 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 EPC1Q9H2F5 836 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 ANKZF1Q9H8Y5 726 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 TMLHEQ9NVH6 421 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 CEP350Q5VT06 3117 aa18.53■□□□□ 0.56
SHKBP1-224ENST00000600718 MICAL3Q7RTP6 2002 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 LRCH4O75427 683 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 FBXO21O94952 628 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 EN2P19622 333 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 PCK1P35558 622 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 FLT3P36888 993 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 CETN2P41208 172 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 MRPL58Q14197 206 aaKnown RBP18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 TAF5Q15542 800 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 FUT10Q6P4F1 479 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 SLC13A5Q86YT5 568 aaPredicted RBP18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 ZMIZ2Q8NF64 920 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 AP1M1Q9BXS5 423 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 PARD6BQ9BYG5 372 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 GPR62Q9BZJ7 368 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 HCSTQ9UBK5 93 aa18.52■□□□□ 0.56
SHKBP1-224ENST00000600718 TARSL2A2RTX5 802 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 GRAP2O75791 330 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 BAIAP3O94812 1187 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 KRT7P08729 469 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 BDNFP23560 247 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 ALDH7A1P49419 539 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 ADIGQ0VDE8 80 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 PPP2R5EQ16537 467 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 RAB41Q5JT25 222 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 TRNP1Q6NT89 227 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 SPATA2LQ8IUW3 424 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 SIX6OS1Q8N1H7 587 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 ARFGAP1Q8N6T3 406 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 CLEC4CQ8WTT0 213 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 KCNK16Q96T55 309 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 CWH43Q9H720 699 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 IL23AQ9NPF7 189 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 GOLGA6L10A0A0M3HER8 536 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 OR6C75A6NL08 312 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 GLI1P08151 1106 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 SDC4P31431 198 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 TKTL1P51854 596 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 MRPS5P82675 430 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 ADCY1Q08828 1119 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 CCDC14Q49A88 953 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 CEP57Q86XR8 500 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 MAIP1Q8WWC4 291 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 ZNF689Q96CS4 500 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 RBM41Q96IZ5 413 aaKnown RBP18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 PNPLA8Q9NP80 782 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 DMAP1Q9NPF5 467 aaPredicted RBP18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 MTUS1Q9ULD2 1270 aa18.51■□□□□ 0.55
SHKBP1-224ENST00000600718 NT5C1B-RDH14C9J2C7 533 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 HHLA1C9JL84 531 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 FSCN2O14926 492 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 TCF4P15884 667 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 GJC1P36383 396 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 PTPN9P43378 593 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 CDR1P51861 262 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 CACNA2D1P54289 1103 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 WDR5P61964 334 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 SLC25A11Q02978 314 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 NFE2Q16621 373 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 CTXN3Q4LDR2 81 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 ZNF280DQ6N043 979 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 KRT12Q99456 494 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 LRRC1Q9BTT6 524 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 OXCT2Q9BYC2 517 aaPredicted RBP18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 CNGB3Q9NQW8 809 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 TMEM30AQ9NV96 361 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 H7C4K7 107 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 SART1O43290 800 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 HSF2BPO75031 334 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 MIPP30301 263 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 COPS2P61201 443 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 ATP13A4Q4VNC1 1196 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 ODF2Q5BJF6 829 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 ZFYVE27Q5T4F4 411 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 C8orf74Q6P047 294 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 CFAP57Q96MR6 1250 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 DDX23Q9BUQ8 820 aaKnown RBP18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 PRKAG2Q9UGJ0 569 aa18.5■□□□□ 0.55
SHKBP1-224ENST00000600718 FNDC1Q4ZHG4 1894 aaPredicted RBP18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 ACRP10323 421 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 MCM3P25205 808 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 NDUFV1P49821 464 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 YWHAZP63104 245 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 DEFB103AP81534 67 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 SMC1AQ14683 1233 aaKnown RBP18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 SLC39A12Q504Y0 691 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 CCDC50Q8IVM0 306 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 KLHL7Q8IXQ5 586 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 RUBCNQ92622 972 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 FUBP3Q96I24 572 aaKnown RBP eCLIP18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 RHOBTB2Q9BYZ6 727 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 RAB21Q9UL25 225 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 USP18Q9UMW8 372 aa18.49■□□□□ 0.55
SHKBP1-224ENST00000600718 LTBP2Q14767 1821 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms