RNA–Protein interactions for RNA: ENST00000600190.1

FARP1-229, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-229ENST00000600190 ZNF507Q8TCN5 953 aa20.11■□□□□ 0.81
FARP1-229ENST00000600190 SMARCE1Q969G3 411 aa20.11■□□□□ 0.81
FARP1-229ENST00000600190 ACDQ96AP0 544 aa20.11■□□□□ 0.81
FARP1-229ENST00000600190 SPATA17Q96L03 361 aa20.11■□□□□ 0.81
FARP1-229ENST00000600190 DUSP15Q9H1R2 295 aaPredicted RBP20.11■□□□□ 0.81
FARP1-229ENST00000600190 HSPBP1Q9NZL4 362 aa20.11■□□□□ 0.81
FARP1-229ENST00000600190 TRPM5Q9NZQ8 1165 aa20.11■□□□□ 0.81
FARP1-229ENST00000600190 ARHGAP26Q9UNA1 814 aa20.11■□□□□ 0.81
FARP1-229ENST00000600190 ANAPC1Q9H1A4 1944 aa20.11■□□□□ 0.81
FARP1-229ENST00000600190 CHD8Q9HCK8 2581 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 NFATC1O95644 943 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 DGKEP52429 567 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 USP46P62068 366 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 SNRPFP62306 86 aaKnown RBP20.1■□□□□ 0.81
FARP1-229ENST00000600190 ELF2Q15723 593 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 WDR49Q8IV35 697 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 PCED1BQ96HM7 432 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 GSDMAQ96QA5 445 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 VPS45Q9NRW7 570 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 CGNQ9P2M7 1197 aaKnown RBP20.1■□□□□ 0.81
FARP1-229ENST00000600190 EBF1Q9UH73 591 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 INVSQ9Y283 1065 aa20.1■□□□□ 0.81
FARP1-229ENST00000600190 LEFTY2O00292 366 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 KLRC4O43908 158 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 RHOBTB1O94844 696 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 RHOBTB3O94955 611 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 ABL1P00519 1130 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 DLATP10515 647 aaKnown RBP20.09■□□□□ 0.81
FARP1-229ENST00000600190 TNNI1P19237 187 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 WARSP23381 471 aaKnown RBP20.09■□□□□ 0.81
FARP1-229ENST00000600190 GBP1P32455 592 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 HOXD13P35453 343 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 GNL1P36915 607 aaPredicted RBP20.09■□□□□ 0.81
FARP1-229ENST00000600190 SEC13P55735 322 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 ZXDBP98169 803 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 CREB5Q02930 508 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 PNOCQ13519 176 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 ST3GAL2Q16842 350 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 C2orf27AQ580R0 203 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 MDH1BQ5I0G3 518 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 N4BP2L1Q5TBK1 243 aaPredicted RBP20.09■□□□□ 0.81
FARP1-229ENST00000600190 TCEAL6Q6IPX3 200 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 TRAPPC11Q7Z392 1133 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 TSTD1Q8NFU3 115 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 CCDC26Q8TAB7 109 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 MYCBPAPQ8TBZ2 947 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 TCEAL3Q969E4 200 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 MRPL45Q9BRJ2 306 aaKnown RBP20.09■□□□□ 0.81
FARP1-229ENST00000600190 SNX25Q9H3E2 840 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 KIAA1586Q9HCI6 787 aa20.09■□□□□ 0.81
FARP1-229ENST00000600190 MYO16Q9Y6X6 1858 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 TM4SF5O14894 197 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 TRIM66O15016 1216 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 CST3P01034 146 aaPredicted RBP20.08■□□□□ 0.81
FARP1-229ENST00000600190 PRR29P0C7W0 189 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 TCF3P15923 654 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 SNRNP35Q16560 246 aaKnown RBP20.08■□□□□ 0.81
FARP1-229ENST00000600190 OR6B3Q8NGW1 331 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 GOLGA5Q8TBA6 731 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 CEP295NLQ96MC4 621 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 FNBP1Q96RU3 617 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 EHD2Q9NZN4 543 aa20.08■□□□□ 0.81
FARP1-229ENST00000600190 ZFHX4Q86UP3 3567 aa20.08■□□□□ 0.8
FARP1-229ENST00000600190 F8VP50 259 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 K7EQS6 105 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 OPRD1P41143 372 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 EHHADHQ08426 723 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 KNOP1Q1ED39 458 aaKnown RBP20.07■□□□□ 0.8
FARP1-229ENST00000600190 RNF43Q68DV7 783 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 FILIP1Q7Z7B0 1213 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 NELFCDQ8IXH7 590 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 CCDC127Q96BQ5 260 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 TPSD1Q9BZJ3 242 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 RNF38Q9H0F5 515 aa20.07■□□□□ 0.8
FARP1-229ENST00000600190 HELZP42694 1942 aaKnown RBP20.07■□□□□ 0.8
FARP1-229ENST00000600190 ZNF840PA6NDX5 716 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 ANTXRLA6NF34 631 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 SCAMP3O14828 347 aaKnown RBP20.06■□□□□ 0.8
FARP1-229ENST00000600190 CLIC2O15247 247 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 CAVIN2O95810 425 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 PFKLP17858 780 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 NOP14P78316 857 aaKnown RBP20.06■□□□□ 0.8
FARP1-229ENST00000600190 IFRD2Q12894 506 aaPredicted RBP20.06■□□□□ 0.8
FARP1-229ENST00000600190 STK4Q13043 487 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 STIM1Q13586 685 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 WDR72Q3MJ13 1102 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 USP39Q53GS9 565 aaKnown RBP20.06■□□□□ 0.8
FARP1-229ENST00000600190 EPM2AIP1Q7L775 607 aaPredicted RBP20.06■□□□□ 0.8
FARP1-229ENST00000600190 TTC30AQ86WT1 665 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 CCDC33Q8N5R6 958 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 USP33Q8TEY7 942 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 TTLL2Q9BWV7 592 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 AGPAT3Q9NRZ7 376 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 SMPD4Q9NXE4 827 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 ANGPTL2Q9UKU9 493 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 NME7Q9Y5B8 376 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 CPQQ9Y646 472 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 KIAA1549LQ6ZVL6 1849 aa20.06■□□□□ 0.8
FARP1-229ENST00000600190 CNOT1A5YKK6 2376 aaKnown RBP20.06■□□□□ 0.8
FARP1-229ENST00000600190 TGFB1I1O43294 461 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms