RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 C12orf29Q8N999 325 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 PDZD8Q8NEN9 1154 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 CSGALNACT1Q8TDX6 532 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 OVCA2Q8WZ82 227 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 CLDN23Q96B33 292 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 ZFYVE19Q96K21 471 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 SLITRK1Q96PX8 696 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 SLC22A12Q96S37 553 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 KCNK16Q96T55 309 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 NELL2Q99435 816 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 HNRNPABQ99729 332 aaKnown RBP8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 SMOQ99835 787 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 ARID3AQ99856 593 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 FAM83CQ9BQN1 747 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 C8orf33Q9H7E9 229 aaPredicted RBP8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 TRPC7Q9HCX4 862 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 CISHQ9NSE2 258 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 FAM49BQ9NUQ9 324 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 THG1LQ9NWX6 298 aaKnown RBP8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 COMMD8Q9NX08 183 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 TRPM5Q9NZQ8 1165 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 RWDD2AQ9UIY3 292 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 ARHGAP26Q9UNA1 814 aa8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 MRPS17Q9Y2R5 130 aaKnown RBP8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 MTF2Q9Y483 593 aaPredicted RBP8.46□□□□□ -1.06
CHMP2A-205ENST00000600006 C2orf78A6NCI8 922 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 FAM170BA6NMN3 283 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 P4HA2O15460 535 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 BEST1O76090 585 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 GNA14O95837 355 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 FAM200BP0CF97 657 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 CD72P21854 359 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 YWHAQP27348 245 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 ADORA2BP29275 332 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 CTHP32929 405 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 RPS9P46781 194 aaKnown RBP8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 RAD23BP54727 409 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 TAF10Q12962 218 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 FZD5Q13467 585 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 CUL2Q13617 745 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 MTF1Q14872 753 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 NFKBIBQ15653 356 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 CT47A1Q5JQC4 288 aaPredicted RBP8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 WDR44Q5JSH3 913 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 CLEC20AQ6ZU45 233 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 RALGPS2Q86X27 583 aaPredicted RBP8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 UBR7Q8N806 425 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 ARL14EPQ8N8R7 260 aaPredicted RBP8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 TATDN2Q93075 761 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 MED15Q96RN5 788 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 DNAI2Q9GZS0 605 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 PNPLA8Q9NP80 782 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 HPS4Q9NQG7 708 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 GTSE1Q9NYZ3 720 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 DACH1Q9UI36 760 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 CACNA1HO95180 2353 aa8.45□□□□□ -1.06
CHMP2A-205ENST00000600006 F5P12259 2224 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 HHLA1C9JL84 531 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 SPECC1L-ADORA2AF8WAN1 911 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 H0Y858 1186 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 NCAM2O15394 837 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 FGFR1OPO95684 399 aaKnown RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 ZDHHC11BP0C7U3 371 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 HDCP19113 662 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 TBXAS1P24557 533 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 HOXD11P31277 338 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 SOX9P48436 509 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 TUBP50607 506 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 KPNA1P52294 538 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 MAP3K7CLP57077 242 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 YWHAEP62258 255 aaKnown RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 SLC7A9P82251 487 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 ZXDBP98169 803 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 TNK2Q07912 1038 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 IFRD2Q12894 506 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 PDGFRLQ15198 375 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 ANGPT1Q15389 498 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 ITPRIPL2Q3MIP1 535 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 ZNF394Q53GI3 561 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 PPP1R26Q5T8A7 1209 aaPredicted RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 SNX30Q5VWJ9 437 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 ARHGAP17Q68EM7 881 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 CAVIN1Q6NZI2 390 aaKnown RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 TXNDC11Q6PKC3 985 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 GPRIN1Q7Z2K8 1008 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 KIAA1958Q8N8K9 716 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 MLKLQ8NB16 471 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 SLC4A11Q8NBS3 891 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 SCAMP5Q8TAC9 235 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 LMO3Q8TAP4 145 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 SH3RF2Q8TEC5 729 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 FAM3CQ92520 227 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 FBXO32Q969P5 355 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 CYFIP2Q96F07 1278 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 TMEM176AQ96HP8 235 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 CYP2S1Q96SQ9 504 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 IER2Q9BTL4 223 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 SRRTQ9BXP5 876 aaKnown RBP8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 CHRDQ9H2X0 955 aa8.44□□□□□ -1.06
CHMP2A-205ENST00000600006 RTN4Q9NQC3 1192 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms