RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 FBXO32Q969P5 355 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 MSANTD3Q96H12 275 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 GCNT4Q9P109 453 aa23.96■■□□□ 1.43
CCDC9-204ENST00000599398 HELZP42694 1942 aaKnown RBP23.95■■□□□ 1.42
CCDC9-204ENST00000599398 ZNF840PA6NDX5 716 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 SPECC1L-ADORA2AF8WAN1 911 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 FAM200BP0CF97 657 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 SLC5A3P53794 718 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 MAP3K7CLP57077 242 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 PAK1Q13153 545 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 MTF1Q14872 753 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 ZNF394Q53GI3 561 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 TRIM68Q6AZZ1 485 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 C1orf228Q6PIY5 440 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 FRMD5Q7Z6J6 570 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 SCAMP5Q8TAC9 235 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 RIN3Q8TB24 985 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 TATDN2Q93075 761 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 SLC35C1Q96A29 364 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 CLDN23Q96B33 292 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 SMOQ99835 787 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 EBF3Q9H4W6 596 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 KIAA1468Q9P260 1216 aa23.95■■□□□ 1.42
CCDC9-204ENST00000599398 CTHP32929 405 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 RPS9P46781 194 aaKnown RBP23.94■■□□□ 1.42
CCDC9-204ENST00000599398 RALGPS2Q86X27 583 aaPredicted RBP23.94■■□□□ 1.42
CCDC9-204ENST00000599398 TTC39CQ8N584 583 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 TRIML1Q8N9V2 468 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 PDZD8Q8NEN9 1154 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 SH3RF2Q8TEC5 729 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 WHAMMQ8TF30 809 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 CYFIP2Q96F07 1278 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 FAXDC2Q96IV6 333 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 ARID3AQ99856 593 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 FAM83CQ9BQN1 747 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 CISHQ9NSE2 258 aa23.94■■□□□ 1.42
CCDC9-204ENST00000599398 TNFRSF10BO14763 440 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 LAMTOR5O43504 91 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 BEST1O76090 585 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 PFKLP17858 780 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 USP4Q13107 963 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 FZD5Q13467 585 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 RUNX3Q13761 415 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 ZNF77Q15935 545 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 ZMIZ2Q8NF64 920 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 JAKMIP2Q96AA8 810 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 HEXIM2Q96MH2 286 aaKnown RBP23.93■■□□□ 1.42
CCDC9-204ENST00000599398 HNRNPABQ99729 332 aaKnown RBP23.93■■□□□ 1.42
CCDC9-204ENST00000599398 LMAN1LQ9HAT1 526 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 ARHGAP26Q9UNA1 814 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 COQ4Q9Y3A0 265 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 PATJQ8NI35 1801 aa23.93■■□□□ 1.42
CCDC9-204ENST00000599398 ARSAP15289 507 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 FMO5P49326 533 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 LRMPQ12912 555 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 PDGFRLQ15198 375 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 FOXR2Q6PJQ5 311 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 TXNDC11Q6PKC3 985 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 ZNF687Q8N1G0 1237 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 OVCA2Q8WZ82 227 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 CSNK1G1Q9HCP0 422 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 HPS4Q9NQG7 708 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 DUS2Q9NX74 493 aaKnown RBP23.92■■□□□ 1.42
CCDC9-204ENST00000599398 CHORDC1Q9UHD1 332 aaPredicted RBP23.92■■□□□ 1.42
CCDC9-204ENST00000599398 WNT6Q9Y6F9 365 aa23.92■■□□□ 1.42
CCDC9-204ENST00000599398 VPS13AQ96RL7 3174 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 NBL1P41271 181 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 IFNAR2P48551 515 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 PON2Q15165 354 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 CLEC20AQ6ZU45 233 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 RNF38Q9H0F5 515 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 COMMD8Q9NX08 183 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 SMPD4Q9NXE4 827 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 MYO16Q9Y6X6 1858 aa23.91■■□□□ 1.42
CCDC9-204ENST00000599398 OAS1P00973 400 aaKnown RBP23.9■■□□□ 1.42
CCDC9-204ENST00000599398 SP9P0CG40 484 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 MBL2P11226 248 aaPredicted RBP23.9■■□□□ 1.42
CCDC9-204ENST00000599398 MTAPQ13126 283 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 CUL2Q13617 745 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 LRRC32Q14392 662 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 PPP1R26Q5T8A7 1209 aaPredicted RBP23.9■■□□□ 1.42
CCDC9-204ENST00000599398 OSCP1Q8WVF1 389 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 TMEM176AQ96HP8 235 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 SRRTQ9BXP5 876 aaKnown RBP23.9■■□□□ 1.42
CCDC9-204ENST00000599398 CHRDQ9H2X0 955 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 FBXO44Q9H4M3 255 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 IL37Q9NZH6 218 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 GMIPQ9P107 970 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 CPQQ9Y646 472 aa23.9■■□□□ 1.42
CCDC9-204ENST00000599398 ZFHX2Q9C0A1 2572 aaPredicted RBP23.9■■□□□ 1.42
CCDC9-204ENST00000599398 OTOL1A6NHN0 477 aaPredicted RBP23.89■■□□□ 1.41
CCDC9-204ENST00000599398 LEFTY2O00292 366 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 GNA14O95837 355 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 CHRNB1P11230 501 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 TCF3P15923 654 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 RAD23BP54727 409 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 SLC7A9P82251 487 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 CETN1Q12798 172 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 CPA6Q8N4T0 437 aa23.89■■□□□ 1.41
CCDC9-204ENST00000599398 SLC4A11Q8NBS3 891 aa23.89■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms