RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 XKR4Q5GH76 650 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 ALKAL1Q6UXT8 129 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 TMEM92Q6UXU6 159 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 PGBD3Q8N328 593 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 MLKLQ8NB16 471 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 WHAMMQ8TF30 809 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 MRPL44Q9H9J2 332 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 TDP1Q9NUW8 608 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 TBC1D7Q9P0N9 293 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 MMP17Q9ULZ9 603 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 APOBEC2Q9Y235 224 aaKnown RBP14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 PTPRBP23467 1997 aa14.91□□□□□ -0.02
SHKBP1-218ENST00000598907 OR6C75A6NL08 312 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 J3QKU1 62 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 EIF3DO15371 548 aaKnown RBP eCLIP14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 SERPINF2P08697 491 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 KCNE1P15382 129 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 CD44P16070 742 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 HOXD13P35453 343 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 DPP6P42658 865 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 PRCPP42785 496 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 MTF1Q14872 753 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 CRY1Q16526 586 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 STX1AQ16623 288 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 DPCR1Q3MIW9 517 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 MGAT5BQ3V5L5 792 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 TXNDC8Q6A555 127 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 TOGARAM2Q6ZUX3 1019 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 SLCO6A1Q86UG4 719 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 SMYD4Q8IYR2 804 aaPredicted RBP14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 GUF1Q8N442 669 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 ZNF843Q8N446 348 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 STKLD1Q8NE28 680 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 SCFD1Q8WVM8 642 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 HMGB4Q8WW32 186 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 HVCN1Q96D96 273 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 ANP32EQ9BTT0 268 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 TMEM134Q9H6X4 195 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 KIF9Q9HAQ2 790 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 CAPN10Q9HC96 672 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 KMT5AQ9NQR1 393 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 ANO10Q9NW15 660 aa14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 DUS2Q9NX74 493 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 URB1O60287 2271 aaKnown RBP14.9□□□□□ -0.02
SHKBP1-218ENST00000598907 MYO18BQ8IUG5 2567 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 OBSL1O75147 1896 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 CITO14578 2027 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 A0A087WV48 116 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 CCDC169A6NNP5 214 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 H0YCG3 227 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 ARHGAP33O14559 1287 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 SLC16A4O15374 487 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 OAZ2O95190 189 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 ABCD1P33897 745 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 PPP1R2P41236 205 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 IFNAR2P48551 515 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 RPL6Q02878 288 aaKnown RBP14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 SPAG1Q07617 926 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 ALCAMQ13740 583 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 ZC2HC1CQ53FD0 456 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 CT47A1Q5JQC4 288 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 PEAR1Q5VY43 1037 aaPredicted RBP14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 DSTYKQ6XUX3 929 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 TAS1R3Q7RTX0 852 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 ALLCQ8N6M5 410 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 CEP76Q8TAP6 659 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 ACAP3Q96P50 834 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 ZDHHC4Q9NPG8 344 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 CNTN3Q9P232 1028 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 TNFSF13BQ9Y275 285 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 PCDHB13Q9Y5F0 798 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 GON4LQ3T8J9 2241 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 UBE4BO95155 1302 aa14.89□□□□□ -0.03
SHKBP1-218ENST00000598907 PYCARD-AS1I3L0S3 204 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 K7ENM7 598 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 M0QZQ0 153 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 TK2O00142 265 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 GCNT3O95395 438 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 EFNA5P52803 228 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 MAP7D1Q3KQU3 841 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 SEZ6Q53EL9 994 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 L1TD1Q5T7N2 865 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 OVOS1Q6IE37 1185 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 ARMCX5Q6P1M9 558 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 ATP2A3Q93084 1043 aa14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 POLMQ9NP87 494 aaPredicted RBP14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 DNAAF2Q9NVR5 837 aaKnown RBP14.88□□□□□ -0.03
SHKBP1-218ENST00000598907 TSC2P49815 1807 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 TCRBV21S2A2A0A5A6 115 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 GOLGA8CPA6NN73 597 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 K7EQS6 105 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 PRPF6O94906 941 aaKnown RBP14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 KLF8O95600 359 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 ITPKBP27987 946 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 HOXD12P35452 270 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 KCNA1Q09470 495 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 SLC39A12Q504Y0 691 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 FOXR2Q6PJQ5 311 aa14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 C11orf57Q6ZUT1 292 aaPredicted RBP14.87□□□□□ -0.03
SHKBP1-218ENST00000598907 STXBP4Q6ZWJ1 553 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms