RNA–Protein interactions for RNA: ENST00000598896.5

SYMPK-212, Transcript of symplekin, humanhuman

TSL 1 (best)

Gene SYMPK, Length 1,899 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-212ENST00000598896 RAB41Q5JT25 222 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 ANKS3Q6ZW76 656 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 SLC26A9Q7LBE3 791 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 ARFGAP1Q8N6T3 406 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 MNS1Q8NEH6 495 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 PGLYRP2Q96PD5 576 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 CCDC66A2RUB6 948 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 ZNF211Q13398 564 aaPredicted RBP24.51■■□□□ 1.51
SYMPK-212ENST00000598896 USP41Q3LFD5 358 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 CFAP221Q4G0U5 840 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 UBL4BQ8N7F7 174 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 CEP112Q8N8E3 955 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 RXFP2Q8WXD0 754 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 HERVK_113Q902F9 699 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 PBKQ96KB5 322 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 CARD9Q9H257 536 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 CHST7Q9NS84 486 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 LCMT1Q9UIC8 334 aa24.51■■□□□ 1.51
SYMPK-212ENST00000598896 SCNN1AP37088 669 aa24.5■■□□□ 1.51
SYMPK-212ENST00000598896 ZNF143P52747 638 aaPredicted RBP24.5■■□□□ 1.51
SYMPK-212ENST00000598896 TMEM169Q96HH4 297 aa24.5■■□□□ 1.51
SYMPK-212ENST00000598896 UBXN6Q9BZV1 441 aa24.5■■□□□ 1.51
SYMPK-212ENST00000598896 CEP104O60308 925 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 GPD1P21695 349 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 ARPP19P56211 112 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 NFE2Q16621 373 aaPredicted RBP24.49■■□□□ 1.51
SYMPK-212ENST00000598896 AADACL2Q6P093 401 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 CC2D1AQ6P1N0 951 aaPredicted RBP24.49■■□□□ 1.51
SYMPK-212ENST00000598896 SIX6OS1Q8N1H7 587 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 TTC9BQ8N6N2 239 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 RIN2Q8WYP3 895 aaPredicted RBP24.49■■□□□ 1.51
SYMPK-212ENST00000598896 CFAP57Q96MR6 1250 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 ULBP1Q9BZM6 244 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 H7C4K7 107 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 ADAM12O43184 909 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 LRCH4O75427 683 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 TADA3O75528 432 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 SOD2P04179 222 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 CPB1P15086 417 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 PDGFRAP16234 1089 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 MRPS5P82675 430 aaKnown RBP24.49■■□□□ 1.51
SYMPK-212ENST00000598896 SH3PXD2AQ5TCZ1 1133 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 HERC6Q8IVU3 1022 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 ATAD1Q8NBU5 361 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 UBE2Q2Q8WVN8 375 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 FUBP3Q96I24 572 aaKnown RBP eCLIP24.49■■□□□ 1.51
SYMPK-212ENST00000598896 ZBED2Q9BTP6 218 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 SPG21Q9NZD8 308 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 NOL12Q9UGY1 213 aaKnown RBP eCLIP24.49■■□□□ 1.519e-6■■□□□ 14.3
SYMPK-212ENST00000598896 CDY1Q9Y6F8 540 aa24.49■■□□□ 1.51
SYMPK-212ENST00000598896 V9GYY5 206 aaPredicted RBP24.49■■□□□ 1.51
SYMPK-212ENST00000598896 VNN2O95498 520 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 GTF2F1P35269 517 aaKnown RBP eCLIP24.48■■□□□ 1.51
SYMPK-212ENST00000598896 SSR1P43307 286 aaKnown RBP24.48■■□□□ 1.51
SYMPK-212ENST00000598896 CKAP4Q07065 602 aaKnown RBP24.48■■□□□ 1.51
SYMPK-212ENST00000598896 C15orf59Q2T9L4 293 aaPredicted RBP24.48■■□□□ 1.51
SYMPK-212ENST00000598896 CCDC14Q49A88 953 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 RAB6CQ53S08 254 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 CCDC181Q5TID7 509 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 TXNRD3NBQ6F5E7 133 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 RASGEF1CQ8N431 466 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 PIK3R5Q8WYR1 880 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 DPF3Q92784 378 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 ABHD8Q96I13 439 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 RAB6CQ9H0N0 254 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 PNPLA8Q9NP80 782 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 MTRRQ9UBK8 725 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 INSL6Q9Y581 213 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 SLC4A7Q9Y6M7 1214 aa24.48■■□□□ 1.51
SYMPK-212ENST00000598896 CTAGE15A4D2H0 777 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 C2CD2LO14523 706 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 CTIFO43310 598 aaKnown RBP24.47■■□□□ 1.51
SYMPK-212ENST00000598896 PSTPIP1O43586 416 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 CTAGE8P0CG41 777 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 PYGMP11217 842 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 RPL17P18621 184 aaKnown RBP24.47■■□□□ 1.51
SYMPK-212ENST00000598896 GRIK1P39086 918 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 GPR17Q13304 367 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 NAA30Q147X3 362 aaPredicted RBP24.47■■□□□ 1.51
SYMPK-212ENST00000598896 COL13A1Q5TAT6 717 aaPredicted RBP24.47■■□□□ 1.51
SYMPK-212ENST00000598896 RNF19BQ6ZMZ0 732 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 ZNF572Q7Z3I7 529 aaPredicted RBP24.47■■□□□ 1.51
SYMPK-212ENST00000598896 CTAGE6Q86UF2 777 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 CTAGE4Q8IX94 777 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 RHOT1Q8IXI2 618 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 FBXO22Q8NEZ5 403 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 RNPC3Q96LT9 517 aaKnown RBP24.47■■□□□ 1.51
SYMPK-212ENST00000598896 CNPY3Q9BT09 278 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 RNF14Q9UBS8 474 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 PCDHB5Q9Y5E4 795 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 UQCRHLA0A096LP55 91 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 UQCRHP07919 91 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 USP17L7P0C7H9 530 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 TERF1P54274 439 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 RWDD2BP57060 319 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 DAOAP59103 153 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 PSMD5Q16401 504 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 ARCQ7LC44 396 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 BHLHA9Q7RTU4 235 aa24.47■■□□□ 1.51
SYMPK-212ENST00000598896 FIBCD1Q8N539 461 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms