RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 NKIRAS1Q9NYS0 192 aa23.76■■□□□ 1.39
SRRM1-222ENST00000596378 HNRNPH1P31943 449 aaKnown RBP23.75■■□□□ 1.39
SRRM1-222ENST00000596378 DUSP28Q4G0W2 176 aa23.75■■□□□ 1.39
SRRM1-222ENST00000596378 LACTB2Q53H82 288 aaPredicted RBP23.75■■□□□ 1.39
SRRM1-222ENST00000596378 C4orf33Q8N1A6 199 aa23.75■■□□□ 1.39
SRRM1-222ENST00000596378 GTF3C2Q8WUA4 911 aaPredicted RBP23.75■■□□□ 1.39
SRRM1-222ENST00000596378 PAIP2Q9BPZ3 127 aaKnown RBP23.75■■□□□ 1.39
SRRM1-222ENST00000596378 CNPY3Q9BT09 278 aa23.75■■□□□ 1.39
SRRM1-222ENST00000596378 KDM4CQ9H3R0 1056 aa23.75■■□□□ 1.39
SRRM1-222ENST00000596378 ABCF3Q9NUQ8 709 aa23.75■■□□□ 1.39
SRRM1-222ENST00000596378 DNAH12Q6ZR08 3092 aa23.75■■□□□ 1.39
SRRM1-222ENST00000596378 RIBC1Q8N443 379 aaPredicted RBP23.75■■□□□ 1.39
SRRM1-222ENST00000596378 GBA2Q9HCG7 927 aaPredicted RBP23.75■■□□□ 1.39
SRRM1-222ENST00000596378 MCF2LO15068 1137 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 OAS1P00973 400 aaKnown RBP23.74■■□□□ 1.39
SRRM1-222ENST00000596378 KRT15P19012 456 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 PCK1P35558 622 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 WDR4P57081 412 aaKnown RBP23.74■■□□□ 1.39
SRRM1-222ENST00000596378 BASP1P80723 227 aaKnown RBP23.74■■□□□ 1.39
SRRM1-222ENST00000596378 SMYD5Q6GMV2 418 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 SCYL2Q6P3W7 929 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 OSMRQ99650 979 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 RSAD1Q9HA92 442 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 GJD2Q9UKL4 321 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 CLEC11AQ9Y240 323 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 ACTL7BQ9Y614 415 aa23.74■■□□□ 1.39
SRRM1-222ENST00000596378 STRNO43815 780 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 DPYSL3Q14195 570 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 ACAP1Q15027 740 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 CCDC14Q49A88 953 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 C1orf228Q6PIY5 440 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 ARHGEF18Q6ZSZ5 1173 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 PCGF5Q86SE9 256 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 SCUBE3Q8IX30 993 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 UPF1Q92900 1129 aaKnown RBP eCLIP23.73■■□□□ 1.39
SRRM1-222ENST00000596378 APOL6Q9BWW8 343 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 ADAMTS10Q9H324 1103 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 UBN1Q9NPG3 1134 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 FAM47DPA6NHR8 397 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 MAP3K6O95382 1288 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 STAU1O95793 577 aaKnown RBP23.73■■□□□ 1.39
SRRM1-222ENST00000596378 FOXN2P32314 431 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 ACVR2BQ13705 512 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 DGKDQ16760 1214 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 ZC3H12AQ5D1E8 599 aaKnown RBP23.73■■□□□ 1.39
SRRM1-222ENST00000596378 CATSPER4Q7RTX7 472 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 ZNF467Q7Z7K2 595 aaPredicted RBP23.73■■□□□ 1.39
SRRM1-222ENST00000596378 ZNF410Q86VK4 478 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 NPLOC4Q8TAT6 608 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 PYROXD1Q8WU10 500 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 LRRN4Q8WUT4 740 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 MAK16Q9BXY0 300 aaKnown RBP23.73■■□□□ 1.39
SRRM1-222ENST00000596378 B3GNT5Q9BYG0 378 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 FRMD8P1Q9BZ68 369 aaPredicted RBP23.73■■□□□ 1.39
SRRM1-222ENST00000596378 DPEP3Q9H4B8 488 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 TRABDQ9H4I3 376 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 SLC40A1Q9NP59 571 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 NGRNQ9NPE2 291 aaKnown RBP23.73■■□□□ 1.39
SRRM1-222ENST00000596378 HAUS2Q9NVX0 235 aa23.73■■□□□ 1.39
SRRM1-222ENST00000596378 A0A1W2PPM1 405 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 PRPSAP2O60256 369 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 GABBR2O75899 941 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 ARL4CP56559 192 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 FAM133BQ5BKY9 247 aaKnown RBP23.72■■□□□ 1.39
SRRM1-222ENST00000596378 PRAMEF19Q5SWL8 479 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 DARS2Q6PI48 645 aaKnown RBP23.72■■□□□ 1.39
SRRM1-222ENST00000596378 TDRPQ86YL5 185 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 FBXO36Q8NEA4 188 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 LENG1Q96BZ8 264 aaPredicted RBP23.72■■□□□ 1.39
SRRM1-222ENST00000596378 TINF2Q9BSI4 451 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 NXF3Q9H4D5 531 aaKnown RBP23.72■■□□□ 1.39
SRRM1-222ENST00000596378 XPO7Q9UIA9 1087 aaKnown RBP23.72■■□□□ 1.39
SRRM1-222ENST00000596378 USP15Q9Y4E8 981 aaPredicted RBP23.72■■□□□ 1.39
SRRM1-222ENST00000596378 GRB14Q14449 540 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 BBS9Q3SYG4 887 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 CGB2Q6NT52 195 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 OLFML1Q6UWY5 402 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 TRPM8Q7Z2W7 1104 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 SNX27Q96L92 541 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 MORF4L1Q9UBU8 362 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 RABGEF1Q9UJ41 708 aa23.72■■□□□ 1.39
SRRM1-222ENST00000596378 ENDOD1O94919 500 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 ROR1Q01973 937 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 DCAF4L1Q3SXM0 396 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 NT5DC4Q86YG4 428 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 MAGEB18Q96M61 343 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 MIS12Q9H081 205 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 GPR32O75388 356 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 GHRP10912 638 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 TFE3P19532 575 aaPredicted RBP23.71■■□□□ 1.39
SRRM1-222ENST00000596378 AKAP5P24588 427 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 KRT81Q14533 505 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 NOMO1Q15155 1222 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 CA9Q16790 459 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 PKDCCQ504Y2 493 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 SLC27A1Q6PCB7 646 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 FAM172AQ8WUF8 416 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 P3H4Q92791 437 aa23.71■■□□□ 1.39
SRRM1-222ENST00000596378 KHSRPQ92945 711 aaKnown RBP eCLIP23.71■■□□□ 1.397e-7■■□□□ 14.3
SRRM1-222ENST00000596378 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms