RNA–Protein interactions for RNA: ENST00000596288.5

MCM3-205, Transcript of minichromosome maintenance complex component 3, humanhuman

TSL 1 (best) BASIC

Gene MCM3, Length 3,169 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-205ENST00000596288 POLNQ7Z5Q5 900 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 MICALL2Q8IY33 904 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 JOSD2Q8TAC2 188 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 DNAJC9Q8WXX5 260 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 SLC7A3Q8WY07 619 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 TTC17Q96AE7 1141 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 WRNIP1Q96S55 665 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 ZNF518BQ9C0D4 1074 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 NIF3L1Q9GZT8 377 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 TRABDQ9H4I3 376 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 PTPRHQ9HD43 1115 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 STK32BQ9NY57 414 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 GINS2Q9Y248 185 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 SNCAIPQ9Y6H5 919 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 TCRBV7S3A2A0A539 114 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 AVILO75366 819 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 SPATA31D3P0C874 917 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 MARK3P27448 753 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 NR1H3Q13133 447 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 PIGHQ14442 188 aaPredicted RBP9.33□□□□□ -0.92
MCM3-205ENST00000596288 ZC3H12AQ5D1E8 599 aaKnown RBP9.33□□□□□ -0.92
MCM3-205ENST00000596288 TMCO4Q5TGY1 634 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 DNAJC24Q6P3W2 148 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 SPATA31D4Q6ZUB0 917 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 MTDHQ86UE4 582 aaKnown RBP9.33□□□□□ -0.92
MCM3-205ENST00000596288 EMC1Q8N766 993 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 TTC16Q8NEE8 873 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 DNERQ8NFT8 737 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 C10orf82Q8WW14 230 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 ACO2Q99798 780 aaKnown RBP9.33□□□□□ -0.92
MCM3-205ENST00000596288 CCDC77Q9BR77 488 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 SLC13A1Q9BZW2 595 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 PHACTR1Q9C0D0 580 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 GPBP1L1Q9HC44 474 aaPredicted RBP9.33□□□□□ -0.92
MCM3-205ENST00000596288 DDX18Q9NVP1 670 aaKnown RBP9.33□□□□□ -0.92
MCM3-205ENST00000596288 FETUBQ9UGM5 382 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 PHTF1Q9UMS5 762 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 CHMP2BQ9UQN3 213 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 A0A0C4DFX4 3053 aa9.33□□□□□ -0.92
MCM3-205ENST00000596288 KIF3CO14782 793 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 TOM1L1O75674 476 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 TMEM63AO94886 807 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 TOP3BO95985 862 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 CD48P09326 243 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 WEE2P0C1S8 567 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 CD19P15391 556 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 RPS12P25398 132 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 IL9RQ01113 521 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 TMED1Q13445 227 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 SETDB1Q15047 1291 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 STXBP2Q15833 593 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 TBC1D25Q3MII6 688 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 PLEKHG4Q58EX7 1191 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 DENND1BQ6P3S1 775 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 DSTYKQ6XUX3 929 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 TTC7BQ86TV6 843 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 HACE1Q8IYU2 909 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 MAB21L3Q8N8X9 362 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 CXorf38Q8TB03 319 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 PRPF31Q8WWY3 499 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 KANSL3Q9P2N6 904 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 NXF1Q9UBU9 619 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 EFR3BQ9Y2G0 817 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 CAPN9O14815 690 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 C1QAP02745 245 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 KRT19P08727 400 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 KRT4P19013 534 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 GMPSP49915 693 aaPredicted RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 AP3M2P53677 418 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 BASP1P80723 227 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 KLC1Q07866 573 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 HHATQ5VTY9 493 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 DCUN1D2Q6PH85 259 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 CEP128Q6ZU80 1094 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 CYP4V2Q6ZWL3 525 aaPredicted RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 SPNS2Q8IVW8 549 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 TMEM35BQ8NCS4 154 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 FAM13CQ8NE31 585 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 ACTL9Q8TC94 416 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 SLC7A6OSQ96CW6 309 aaPredicted RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 CLPTM1LQ96KA5 538 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 PGLYRP2Q96PD5 576 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 LRMDAQ9H2I8 198 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 DENND2DQ9H6A0 471 aaPredicted RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 AS3MTQ9HBK9 375 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 SSU72Q9NP77 194 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 DDX56Q9NY93 547 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 SLC24A2Q9UI40 661 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 CORO1CQ9ULV4 474 aaPredicted RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 WASF2Q9Y6W5 498 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 IGKV6-21A0A0C4DH24 114 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 C19orf81C9J6K1 198 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 HNRNPRO43390 633 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 FAM155BO75949 473 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 NEK3P51956 506 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 OTUD4Q01804 1114 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 TAP1Q03518 808 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 PDIA2Q13087 525 aaKnown RBP9.32□□□□□ -0.92
MCM3-205ENST00000596288 PPP2R5DQ14738 602 aa9.32□□□□□ -0.92
MCM3-205ENST00000596288 CTC1Q2NKJ3 1217 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms