RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 C8orf48Q96LL4 319 aa10.64□□□□□ -0.71
LIG1-209ENST00000596104 CLIC6Q96NY7 704 aa10.64□□□□□ -0.71
LIG1-209ENST00000596104 PNKPQ96T60 521 aa10.64□□□□□ -0.71
LIG1-209ENST00000596104 SCNM1Q9BWG6 230 aa10.64□□□□□ -0.71
LIG1-209ENST00000596104 TMEM74BQ9NUR3 256 aa10.64□□□□□ -0.71
LIG1-209ENST00000596104 SMPD4Q9NXE4 827 aa10.64□□□□□ -0.71
LIG1-209ENST00000596104 MBD1Q9UIS9 605 aaPredicted RBP10.64□□□□□ -0.71
LIG1-209ENST00000596104 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.64□□□□□ -0.71
LIG1-209ENST00000596104 ZFYVE26Q68DK2 2539 aa10.64□□□□□ -0.71
LIG1-209ENST00000596104 ZZEF1O43149 2961 aa10.64□□□□□ -0.71
LIG1-209ENST00000596104 ABCA7Q8IZY2 2146 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 TMEM8BA6NDV4 472 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 ZNF233A6NK53 670 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 SLC9A3R1O14745 358 aaPredicted RBP10.63□□□□□ -0.71
LIG1-209ENST00000596104 TRIM66O15016 1216 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 ADAM23O75077 832 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 KAT7O95251 611 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 KLF8O95600 359 aaPredicted RBP10.63□□□□□ -0.71
LIG1-209ENST00000596104 TNNC2P02585 160 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 ANXA13P27216 316 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 TIE1P35590 1138 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 CYP27A1Q02318 531 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 LMAN2Q12907 356 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 TAF10Q12962 218 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 RESTQ13127 1097 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 SURF1Q15526 300 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 DUOXA2Q1HG44 320 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 UAP1L1Q3KQV9 507 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 MDH1BQ5I0G3 518 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 PEAR1Q5VY43 1037 aaPredicted RBP10.63□□□□□ -0.71
LIG1-209ENST00000596104 CCDC73Q6ZRK6 1079 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 PIP4P1Q86T03 277 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 TTC30AQ86WT1 665 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 SYT12Q8IV01 421 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 WDR49Q8IV35 697 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 TMEFF1Q8IYR6 380 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 WHAMMQ8TF30 809 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 NOC3LQ8WTT2 800 aaKnown RBP10.63□□□□□ -0.71
LIG1-209ENST00000596104 ZFRQ96KR1 1074 aaKnown RBP10.63□□□□□ -0.71
LIG1-209ENST00000596104 MRPL45Q9BRJ2 306 aaKnown RBP10.63□□□□□ -0.71
LIG1-209ENST00000596104 ZDHHC4Q9NPG8 344 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 ARHGEF4Q9NR80 690 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 PANK4Q9NVE7 773 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 EHD2Q9NZN4 543 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 CFAP97Q9P2B7 532 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 ATRXP46100 2492 aa10.63□□□□□ -0.71
LIG1-209ENST00000596104 TACC1O75410 805 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 ADH1CP00326 375 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 CST3P01034 146 aaPredicted RBP10.62□□□□□ -0.71
LIG1-209ENST00000596104 APODP05090 189 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 FAM163BP0C2L3 166 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 ADH5P11766 374 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 ENGP17813 658 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 HOXD13P35453 343 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 GNL1P36915 607 aaPredicted RBP10.62□□□□□ -0.71
LIG1-209ENST00000596104 TXLNAP40222 546 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 GRIA2P42262 883 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 TNFRSF4P43489 277 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 SEMA3BQ13214 749 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 SPDYCQ5MJ68 293 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 EOGTQ5NDL2 527 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 LY6G5CQ5SRR4 150 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 FAM173BQ6P4H8 233 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 SLC23A3Q6PIS1 610 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 ARMCX6Q7L4S7 300 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 TRAPPC11Q7Z392 1133 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 ETFBKMTQ8IXQ9 262 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 SPACA7Q96KW9 195 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 MMS19Q96T76 1030 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 NUSAP1Q9BXS6 441 aaKnown RBP10.62□□□□□ -0.71
LIG1-209ENST00000596104 ZNF518BQ9C0D4 1074 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 POLMQ9NP87 494 aaPredicted RBP10.62□□□□□ -0.71
LIG1-209ENST00000596104 HSPBP1Q9NZL4 362 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 PILRBQ9UKJ0 227 aa10.62□□□□□ -0.71
LIG1-209ENST00000596104 R3HCC1Q9Y3T6 440 aaKnown RBP10.62□□□□□ -0.71
LIG1-209ENST00000596104 MORC2Q9Y6X9 1032 aaPredicted RBP10.62□□□□□ -0.71
LIG1-209ENST00000596104 ATXN2Q99700 1313 aaKnown RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 SPEGQ15772 3267 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 KIAA1549LQ6ZVL6 1849 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 TCRBV21S2A2A0A5A6 115 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 E2F8A0AVK6 867 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 VPS37CA5D8V6 355 aaPredicted RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 SRRM3A6NNA2 597 aaPredicted RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 UPK3BL1B0FP48 263 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 PALM2-AKAP2B1ALY0 433 aaPredicted RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 UPK3BL2E5RIL1 263 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 CLDN5O00501 218 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 HOXC11O43248 304 aaPredicted RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 MAP3K13O43283 966 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 HYAL3O43820 417 aaPredicted RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 ABL1P00519 1130 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 MBL2P11226 248 aaPredicted RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 HOXB3P14651 431 aaPredicted RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 PTPN1P18031 435 aaKnown RBP10.61□□□□□ -0.71
LIG1-209ENST00000596104 ITPKAP23677 461 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 HOXD12P35452 270 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 STAT6P42226 847 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 MAPK8P45983 427 aa10.61□□□□□ -0.71
LIG1-209ENST00000596104 KDSRQ06136 332 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms