RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CYTH4Q9UIA0 394 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 MUTYHQ9UIF7 546 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 SCINQ9Y6U3 715 aa13.77□□□□□ -0.21
SHKBP1-209ENST00000595803 CACNA1HO95180 2353 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 XPO1O14980 1071 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 ATMINO43313 823 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 PALMO75781 387 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 AP1G2O75843 785 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 SOD2P04179 222 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 NPR3P17342 541 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 GABRB2P47870 512 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 ARPP19P56211 112 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 NFE2Q16621 373 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 PTPN20Q4JDL3 420 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 SLC39A12Q504Y0 691 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 CYP4A22Q5TCH4 519 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 OR6B2Q6IFH4 312 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 PLEKHA7Q6IQ23 1121 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 PMF1Q6P1K2 205 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 DNAJC24Q6P3W2 148 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 DDX53Q86TM3 631 aaKnown RBP13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 FAM35AQ86V20 835 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 ADHFE1Q8IWW8 467 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 SYCE1Q8N0S2 351 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 TPCN2Q8NHX9 752 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 FEZF2Q8TBJ5 459 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 ZNF564Q8TBZ8 553 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 SMARCD1Q96GM5 515 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 B3GALT6Q96L58 329 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 CPXM1Q96SM3 734 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 HERC2P3Q9BVR0 1158 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 SLC4A5Q9BY07 1137 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 UBXN6Q9BZV1 441 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 CYLDQ9NQC7 956 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 TMLHEQ9NVH6 421 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 STK39Q9UEW8 545 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 CHORDC1Q9UHD1 332 aaPredicted RBP13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 CACNA1BQ00975 2339 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 KMT2EQ8IZD2 1858 aa13.76□□□□□ -0.21
SHKBP1-209ENST00000595803 CTAGE9A4FU28 777 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 GOLGA8SH3BPF8 625 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 TULP2O00295 520 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 MTA2O94776 668 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 EFEMP2O95967 443 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 ERBB2P04626 1255 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 OR4Q2P0C623 313 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 BDNFP23560 247 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 CDR1P51861 262 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 HADHBP55084 474 aaKnown RBP13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 MAP3K7CLP57077 242 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 SMARCB1Q12824 385 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 MAMLD1Q13495 774 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 CCDC142Q17RM4 750 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 RTP2Q5QGT7 225 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 DCUN1D2Q6PH85 259 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 TMEM110Q86TL2 294 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 SP7Q8TDD2 431 aaPredicted RBP13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 WDR24Q96S15 920 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 PKMYT1Q99640 499 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 LRRC4Q9HBW1 653 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 KRT82Q9NSB4 513 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 PCDHB5Q9Y5E4 795 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 BACE2Q9Y5Z0 518 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 CAPN6Q9Y6Q1 641 aa13.75□□□□□ -0.21
SHKBP1-209ENST00000595803 GRID2IPA4D2P6 1211 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 SIGLEC16A6NMB1 481 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 TMEM110-MUSTN1A8MSY1 372 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 E5RJQ4 531 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 MYO1FO00160 1098 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 PIK3R2O00459 728 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 C2CD2LO14523 706 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 FGF18O76093 207 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 KRT3P12035 628 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 LCP1P13796 627 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 CPB1P15086 417 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 GRIK1P39086 918 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 PLA2G4AP47712 749 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 GLUD2P49448 558 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 MESDQ14696 234 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 PSMD5Q16401 504 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 PRSS55Q6UWB4 352 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 CLEC20AQ6ZU45 233 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 BMP8AQ7Z5Y6 402 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 DAAM2Q86T65 1068 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 PIGZQ86VD9 579 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 XYLT1Q86Y38 959 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 ZDHHC17Q8IUH5 632 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 RNF168Q8IYW5 571 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 C3orf20Q8ND61 904 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 PIK3R5Q8WYR1 880 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 KCTD13Q8WZ19 329 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 MCRS1Q96EZ8 462 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 NAPGQ99747 312 aaPredicted RBP13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 SMOQ99835 787 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 ALG13Q9NP73 1137 aaKnown RBP13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 CHST7Q9NS84 486 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 AMFRQ9UKV5 643 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 FAM50BQ9Y247 325 aa13.74□□□□□ -0.21
SHKBP1-209ENST00000595803 SSX2IPQ9Y2D8 614 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms