RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 TRDMT1O14717 391 aaKnown RBP13.82□□□□□ -0.2
VRK3-209ENST00000594948 MAP3K7O43318 606 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 ADCY3O60266 1144 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 FAM189A1O60320 539 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 TBX10O75333 385 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 ENDOD1O94919 500 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 CST3P01034 146 aaPredicted RBP13.82□□□□□ -0.2
VRK3-209ENST00000594948 BGNP21810 368 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 IL1R2P27930 398 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 PEX19P40855 299 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 DYNLT1P63172 113 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 FAAP100Q0VG06 881 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 NOMO1Q15155 1222 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 DUOXA2Q1HG44 320 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 OR52E8Q6IFG1 317 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 SLC30A9Q6PML9 568 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 RFX6Q8HWS3 928 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 REPS2Q8NFH8 660 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 TEKT4Q8WW24 435 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 NRG4Q8WWG1 115 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 TTC17Q96AE7 1141 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 TMEM143Q96AN5 459 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 NR1H4Q96RI1 486 aaPredicted RBP13.82□□□□□ -0.2
VRK3-209ENST00000594948 KLF6Q99612 283 aaPredicted RBP13.82□□□□□ -0.2
VRK3-209ENST00000594948 ADAM33Q9BZ11 813 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 RPAP3Q9H6T3 665 aaPredicted RBP13.82□□□□□ -0.2
VRK3-209ENST00000594948 ZWILCHQ9H900 591 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 ZNF302Q9NR11 478 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 ARHGEF4Q9NR80 690 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 DDX43Q9NXZ2 648 aaKnown RBP13.82□□□□□ -0.2
VRK3-209ENST00000594948 CHMP2BQ9UQN3 213 aa13.82□□□□□ -0.2
VRK3-209ENST00000594948 KBTBD13C9JR72 458 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 I3L4J1 428 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 COPEO14579 308 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 KRT37O76014 449 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 RBP3P10745 1247 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 MYL2P10916 166 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 PYGBP11216 843 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 CHRNA5P30532 468 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 ICAM3P32942 547 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 PGM1P36871 562 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 EFNA5P52803 228 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 MYL6P60660 151 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 ROR1Q01973 937 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 KBTBD12Q3ZCT8 623 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 PTPN20Q4JDL3 420 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 DNAL1Q4LDG9 190 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 FAM47CQ5HY64 1035 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 CYP4A22Q5TCH4 519 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 PDCD7Q8N8D1 485 aaKnown RBP13.81□□□□□ -0.2
VRK3-209ENST00000594948 SLC4A11Q8NBS3 891 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 JOSD2Q8TAC2 188 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 SLC7A3Q8WY07 619 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 TFAP2BQ92481 460 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 IQCGQ9H095 443 aaKnown RBP13.81□□□□□ -0.2
VRK3-209ENST00000594948 WWP1Q9H0M0 922 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 VPS33BQ9H267 617 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 GPAMQ9HCL2 828 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 FBXO6Q9NRD1 293 aaPredicted RBP13.81□□□□□ -0.2
VRK3-209ENST00000594948 SCN4AP35499 1836 aa13.81□□□□□ -0.2
VRK3-209ENST00000594948 IGKV6D-21A0A0A0MT36 114 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 SPDYE5A6NIY4 337 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 TOM1L1O75674 476 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 C1QAP02745 245 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 SNRPAP09012 282 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 PRKCHP24723 683 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 MAGEA6P43360 314 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 TUBP50607 506 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 BASP1P80723 227 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 ROR2Q01974 943 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 CNTN2Q02246 1040 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 TFDP2Q14188 446 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 RCN2Q14257 317 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 TRMT5Q32P41 509 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 C6orf163Q5TEZ5 329 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 DENND1BQ6P3S1 775 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 IGDCC3Q8IVU1 814 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 SCYL3Q8IZE3 742 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 KCTD6Q8NC69 237 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 SPDYE1Q8NFV5 336 aaPredicted RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 GATA6Q92908 595 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 LRRC39Q96DD0 335 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 RTP4Q96DX8 246 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 MTBPQ96DY7 904 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 SRPK1Q96SB4 655 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 SIKE1Q9BRV8 207 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 FAM192AQ9GZU8 254 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 C1orf21Q9H246 121 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 C12orf65Q9H3J6 166 aaKnown RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 SIRPGQ9P1W8 387 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 PAK5Q9P286 719 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 PDP2Q9P2J9 529 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 SAE1Q9UBE0 346 aaPredicted RBP13.8□□□□□ -0.2
VRK3-209ENST00000594948 SORCS3Q9UPU3 1222 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 PLLPQ9Y342 182 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 TTLL3Q9Y4R7 772 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 COL4A5P29400 1685 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 OGTO15294 1046 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 SMIM24O75264 130 aa13.8□□□□□ -0.2
VRK3-209ENST00000594948 RAD17O75943 681 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms