RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 MYO3BQ8WXR4 1341 aa12.78□□□□□ -0.36
LIG1-207ENST00000594759 ANKRD63C9JTQ0 380 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 PFDN6O15212 129 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 DDX3YO15523 660 aaKnown RBP12.77□□□□□ -0.36
LIG1-207ENST00000594759 AKAP3O75969 853 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 PDGFRBP09619 1106 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 NPR1P16066 1061 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 TUBA4AP68366 448 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 PTK6Q13882 451 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 NEDD8Q15843 81 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 SFT2D3Q587I9 215 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 GPR107Q5VW38 600 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 FOXB2Q5VYV0 432 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 POTEHQ6S545 545 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 ADGRA1Q86SQ6 560 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 CERKQ8TCT0 537 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 TNFRSF25Q93038 417 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 BHMTQ93088 406 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 FAF2Q96CS3 445 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 GOLGA8CPA6NN73 597 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 SLC16A3O15427 465 aaKnown RBP12.77□□□□□ -0.36
LIG1-207ENST00000594759 EIF2AK2P19525 551 aaKnown RBP12.77□□□□□ -0.36
LIG1-207ENST00000594759 EN1Q05925 392 aaPredicted RBP12.77□□□□□ -0.36
LIG1-207ENST00000594759 TFDP1Q14186 410 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 RPS6KA2Q15349 733 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 LRRC8EQ6NSJ5 796 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 BNC2Q6ZN30 1099 aaPredicted RBP12.77□□□□□ -0.36
LIG1-207ENST00000594759 DENND5BQ6ZUT9 1274 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 LRP10Q7Z4F1 713 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 PDSS2Q86YH6 399 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 PLEKHO2Q8TD55 490 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 WNK4Q96J92 1243 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 DNAJC16Q9Y2G8 782 aa12.77□□□□□ -0.36
LIG1-207ENST00000594759 NEMP1O14524 444 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 SLC37A4O43826 429 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 ZNF862O60290 1169 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 SIN3BO75182 1162 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 RRM1P23921 792 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 GARSP41250 739 aaKnown RBP12.77□□□□□ -0.37
LIG1-207ENST00000594759 PTGIRP43119 386 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 BCAP31P51572 246 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 ZNF772Q68DY9 489 aaPredicted RBP12.77□□□□□ -0.37
LIG1-207ENST00000594759 PNMA5Q96PV4 448 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 MIPEPQ99797 713 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 C11orf70Q9BRQ4 267 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 OXCT2Q9BYC2 517 aaPredicted RBP12.77□□□□□ -0.37
LIG1-207ENST00000594759 TAS2R14Q9NYV8 317 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 LGALS13Q9UHV8 139 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 FBXO9Q9UK97 447 aaPredicted RBP12.77□□□□□ -0.37
LIG1-207ENST00000594759 SSX2IPQ9Y2D8 614 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 SAT1P21673 171 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 NMT1P30419 496 aaKnown RBP12.77□□□□□ -0.37
LIG1-207ENST00000594759 SPIDRQ14159 915 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 C6orf52Q5T4I8 152 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 KCNK18Q7Z418 384 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 ZFP28Q8NHY6 868 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 TRPC4APQ8TEL6 797 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 SLC20A1Q8WUM9 679 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 DCLK3Q9C098 648 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 COA1Q9GZY4 146 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 HMG20AQ9NP66 347 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 FIS1Q9Y3D6 152 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 PCDHA3Q9Y5H8 950 aa12.77□□□□□ -0.37
LIG1-207ENST00000594759 GOLGA8IPA6NC78 632 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 GOLGA8JA6NMD2 632 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 PIAS1O75925 651 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 TTKP33981 857 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 SYCP2LQ5T4T6 812 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 DHRS1Q96LJ7 313 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 CALN1Q9BXU9 219 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 CEP44Q9C0F1 390 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 LRRC19Q9H756 370 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 GTF3C4Q9UKN8 822 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 SCAF8Q9UPN6 1271 aaKnown RBP12.76□□□□□ -0.37
LIG1-207ENST00000594759 EMSYQ7Z589 1322 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 CYTH3O43739 400 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 TRIM16O95361 564 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 ZBED1O96006 694 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 UBAP2LQ14157 1087 aaKnown RBP12.76□□□□□ -0.37
LIG1-207ENST00000594759 CCNG2Q16589 344 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 AOC3Q16853 763 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 RC3H1Q5TC82 1133 aaKnown RBP12.76□□□□□ -0.37
LIG1-207ENST00000594759 SLFN11Q7Z7L1 901 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 C4orf32Q8N8J7 132 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 FBXO36Q8NEA4 188 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 RAB26Q9ULW5 256 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 PSMD13Q9UNM6 376 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 SPAG6O75602 509 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 OXSR1O95747 527 aaPredicted RBP12.76□□□□□ -0.37
LIG1-207ENST00000594759 THRAP10827 490 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 TNNI1P19237 187 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 FGFR2P21802 821 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 IL10P22301 178 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 IREB2P48200 963 aaKnown RBP12.76□□□□□ -0.37
LIG1-207ENST00000594759 SLC15A2Q16348 729 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 ZNF423Q2M1K9 1284 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 FBXO33Q7Z6M2 555 aa12.76□□□□□ -0.37
LIG1-207ENST00000594759 ZCCHC9Q8N567 271 aaKnown RBP12.76□□□□□ -0.37
LIG1-207ENST00000594759 TRIM63Q969Q1 353 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms