RNA–Protein interactions for RNA: ENST00000593641.3

SSBP4-203, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-203ENST00000593641 KMT2BQ9UMN6 2715 aaPredicted RBP24.12■■□□□ 1.45
SSBP4-203ENST00000593641 A8MXQ7 604 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 DCLK1O15075 740 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 PTPN1P18031 435 aaKnown RBP24.12■■□□□ 1.45
SSBP4-203ENST00000593641 OPRD1P41143 372 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 CREB5Q02930 508 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 IFRD2Q12894 506 aaPredicted RBP24.12■■□□□ 1.45
SSBP4-203ENST00000593641 TAF10Q12962 218 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 C2orf27AQ580R0 203 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 FILIP1Q7Z7B0 1213 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 C11orf74Q86VG3 221 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 B3GALNT2Q8NCR0 500 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 USP33Q8TEY7 942 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 DPEP3Q9H4B8 488 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 SMPD4Q9NXE4 827 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 NXF1Q9UBU9 619 aaKnown RBP24.12■■□□□ 1.45
SSBP4-203ENST00000593641 NME7Q9Y5B8 376 aa24.12■■□□□ 1.45
SSBP4-203ENST00000593641 OLFM2O95897 454 aa24.11■■□□□ 1.45
SSBP4-203ENST00000593641 CYP17A1P05093 508 aa24.11■■□□□ 1.45
SSBP4-203ENST00000593641 ATICP31939 592 aa24.11■■□□□ 1.45
SSBP4-203ENST00000593641 USP39Q53GS9 565 aaKnown RBP24.11■■□□□ 1.45
SSBP4-203ENST00000593641 RNF43Q68DV7 783 aa24.11■■□□□ 1.45
SSBP4-203ENST00000593641 SHC4Q6S5L8 630 aa24.11■■□□□ 1.45
SSBP4-203ENST00000593641 DDX42Q86XP3 938 aaKnown RBP eCLIP24.11■■□□□ 1.45
SSBP4-203ENST00000593641 SYAP1Q96A49 352 aaPredicted RBP24.11■■□□□ 1.45
SSBP4-203ENST00000593641 ZNF518BQ9C0D4 1074 aa24.11■■□□□ 1.45
SSBP4-203ENST00000593641 RNF38Q9H0F5 515 aa24.11■■□□□ 1.45
SSBP4-203ENST00000593641 CGNQ9P2M7 1197 aaKnown RBP24.11■■□□□ 1.45
SSBP4-203ENST00000593641 K7EQS6 105 aa24.1■■□□□ 1.45
SSBP4-203ENST00000593641 POLR2DO15514 142 aaKnown RBP24.1■■□□□ 1.45
SSBP4-203ENST00000593641 PHACTR2O75167 634 aa24.1■■□□□ 1.45
SSBP4-203ENST00000593641 STAU1O95793 577 aaKnown RBP24.1■■□□□ 1.45
SSBP4-203ENST00000593641 OAS1P00973 400 aaKnown RBP24.1■■□□□ 1.45
SSBP4-203ENST00000593641 MBL2P11226 248 aaPredicted RBP24.1■■□□□ 1.45
SSBP4-203ENST00000593641 CHAMP1Q96JM3 812 aa24.1■■□□□ 1.45
SSBP4-203ENST00000593641 TPSD1Q9BZJ3 242 aa24.1■■□□□ 1.45
SSBP4-203ENST00000593641 MMP17Q9ULZ9 603 aa24.1■■□□□ 1.45
SSBP4-203ENST00000593641 ATP8B3O60423 1300 aa24.1■■□□□ 1.45
SSBP4-203ENST00000593641 GON4LQ3T8J9 2241 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 TM4SF5O14894 197 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 EXOC3O60645 756 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 RTN3O95197 1032 aaPredicted RBP24.09■■□□□ 1.45
SSBP4-203ENST00000593641 CAVIN2O95810 425 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 ADH1CP00326 375 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 YWHAQP27348 245 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 CACNA2D1P54289 1103 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 MYL6P60660 151 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 EHHADHQ08426 723 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 DHCR24Q15392 516 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 TCEAL6Q6IPX3 200 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 ANO7Q6IWH7 933 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 ADGRG2Q8IZP9 1017 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 NUP93Q8N1F7 819 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 PDZD8Q8NEN9 1154 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 TCEAL3Q969E4 200 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 CNOT6LQ96LI5 555 aaKnown RBP24.09■■□□□ 1.45
SSBP4-203ENST00000593641 EDEM2Q9BV94 578 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 BLZF1Q9H2G9 400 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 CFAP97Q9P2B7 532 aa24.09■■□□□ 1.45
SSBP4-203ENST00000593641 BCLAF3A2AJT9 711 aaKnown RBP24.08■■□□□ 1.45
SSBP4-203ENST00000593641 CLDN5O00501 218 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 MRPS21P82921 87 aaKnown RBP24.08■■□□□ 1.45
SSBP4-203ENST00000593641 BIRC3Q13489 604 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 BMT2Q1RMZ1 405 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 GAB4Q2WGN9 574 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 RASSF3Q86WH2 238 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 C12orf56Q8IXR9 622 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 ZNF516Q92618 1163 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 FBXO32Q969P5 355 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 B3GNT5Q9BYG0 378 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 SLC39A2Q9NP94 309 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 TMEM30AQ9NV96 361 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 FAM13BQ9NYF5 915 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 ANGPTL2Q9UKU9 493 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 INVSQ9Y283 1065 aa24.08■■□□□ 1.45
SSBP4-203ENST00000593641 PVALEFA0A1B0GWK0 134 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 SCAMP3O14828 347 aaKnown RBP24.07■■□□□ 1.44
SSBP4-203ENST00000593641 ALDH1A2O94788 518 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 APODP05090 189 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 CASP1P29466 404 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 EIF2DP41214 584 aaKnown RBP24.07■■□□□ 1.44
SSBP4-203ENST00000593641 CRY1Q16526 586 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 ST3GAL2Q16842 350 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 KNOP1Q1ED39 458 aaKnown RBP24.07■■□□□ 1.44
SSBP4-203ENST00000593641 ZNF699Q32M78 642 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 N4BP2L1Q5TBK1 243 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-203ENST00000593641 FOXD4L5Q5VV16 416 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-203ENST00000593641 PMS2CLQ68D20 193 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 TTC30AQ86WT1 665 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 CCDC33Q8N5R6 958 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 GOLGA5Q8TBA6 731 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 FOXD4L4Q8WXT5 416 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-203ENST00000593641 OVCA2Q8WZ82 227 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 PNKPQ96T60 521 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 MED10Q9BTT4 135 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 LSM14BQ9BX40 385 aaKnown RBP24.07■■□□□ 1.44
SSBP4-203ENST00000593641 XYLT2Q9H1B5 865 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 TBC1D14Q9P2M4 693 aa24.07■■□□□ 1.44
SSBP4-203ENST00000593641 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.06■■□□□ 1.44
SSBP4-203ENST00000593641 KRT37O76014 449 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms