RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 FOXD4L1Q9NU39 408 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 CFAP97Q9P2B7 532 aa18.63■□□□□ 0.57
RETREG3-212ENST00000593251 CLDN5O00501 218 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 CLIC2O15247 247 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 PFKLP17858 780 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 TNNI1P19237 187 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 TIE1P35590 1138 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 DHPSP49366 369 aaPredicted RBP18.62■□□□□ 0.57
RETREG3-212ENST00000593251 CYP2J2P51589 502 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 NOP14P78316 857 aaKnown RBP18.62■□□□□ 0.57
RETREG3-212ENST00000593251 CRY1Q16526 586 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 SNRNP35Q16560 246 aaKnown RBP18.62■□□□□ 0.57
RETREG3-212ENST00000593251 EMC10Q5UCC4 262 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 CYP2U1Q7Z449 544 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 C12orf40Q86WS4 652 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 ALLCQ8N6M5 410 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 TXNDC5Q8NBS9 432 aaKnown RBP18.62■□□□□ 0.57
RETREG3-212ENST00000593251 RLN3Q8WXF3 142 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 CCDC127Q96BQ5 260 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 CNOT6LQ96LI5 555 aaKnown RBP18.62■□□□□ 0.57
RETREG3-212ENST00000593251 C8orf48Q96LL4 319 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 CEP295NLQ96MC4 621 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 ZNF518BQ9C0D4 1074 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 CIZ1Q9ULV3 898 aaPredicted RBP18.62■□□□□ 0.57
RETREG3-212ENST00000593251 MTMR6Q9Y217 621 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 PI4KAP42356 2102 aa18.62■□□□□ 0.57
RETREG3-212ENST00000593251 KHNYNO15037 678 aaKnown RBP18.61■□□□□ 0.57
RETREG3-212ENST00000593251 TGFB1I1O43294 461 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 KLF8O95600 359 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-212ENST00000593251 OLFM2O95897 454 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 OAS1P00973 400 aaKnown RBP18.61■□□□□ 0.57
RETREG3-212ENST00000593251 MBL2P11226 248 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-212ENST00000593251 PTPN1P18031 435 aaKnown RBP18.61■□□□□ 0.57
RETREG3-212ENST00000593251 ASIC1P78348 528 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 KDSRQ06136 332 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 WDR72Q3MJ13 1102 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 TDRD10Q5VZ19 366 aaKnown RBP18.61■□□□□ 0.57
RETREG3-212ENST00000593251 EPM2AIP1Q7L775 607 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-212ENST00000593251 NELFCDQ8IXH7 590 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 FRMD1Q8N878 549 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 PIGKQ92643 395 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 FNBP1Q96RU3 617 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 PNKPQ96T60 521 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 CGRRF1Q99675 332 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 B3GNT5Q9BYG0 378 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 TRIM9Q9C026 710 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 TNMDQ9H2S6 317 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 KIAA1586Q9HCI6 787 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 EHD2Q9NZN4 543 aa18.61■□□□□ 0.57
RETREG3-212ENST00000593251 MORC2Q9Y6X9 1032 aaPredicted RBP18.61■□□□□ 0.57
RETREG3-212ENST00000593251 CEP295Q9C0D2 2601 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 SGK1O00141 431 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 TACC1O75410 805 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 KAT7O95251 611 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 PPP3CCP48454 512 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 TNNC1P63316 161 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 MRPS21P82921 87 aaKnown RBP18.6■□□□□ 0.57
RETREG3-212ENST00000593251 CYP24A1Q07973 514 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 STK38Q15208 465 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 E2F4Q16254 413 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 SH3PXD2AQ5TCZ1 1133 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 DAB2IPQ5VWQ8 1189 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 RHBDF2Q6PJF5 856 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 ARMCX6Q7L4S7 300 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 IL17RCQ8NAC3 791 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 ZNF507Q8TCN5 953 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 ZNF516Q92618 1163 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 DHX58Q96C10 678 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 SLITRK1Q96PX8 696 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 AGPAT3Q9NRZ7 376 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 KBTBD4Q9NVX7 518 aa18.6■□□□□ 0.57
RETREG3-212ENST00000593251 RALYQ9UKM9 306 aaKnown RBP18.6■□□□□ 0.57
RETREG3-212ENST00000593251 ASCC3Q8N3C0 2202 aaKnown RBP18.59■□□□□ 0.57
RETREG3-212ENST00000593251 A8MXQ7 604 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 SLC9A3R1O14745 358 aaPredicted RBP18.59■□□□□ 0.57
RETREG3-212ENST00000593251 EIF3DO15371 548 aaKnown RBP eCLIP18.59■□□□□ 0.57
RETREG3-212ENST00000593251 APODP05090 189 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 CHRM1P11229 460 aaPredicted RBP18.59■□□□□ 0.57
RETREG3-212ENST00000593251 NASPP49321 788 aaPredicted RBP18.59■□□□□ 0.57
RETREG3-212ENST00000593251 MYL6P60660 151 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 IRX4P78413 519 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 ZNF252P-AS1Q0IIN9 211 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 FOXC1Q12948 553 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 PSMD6Q15008 389 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 FAM26FQ5R3K3 315 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 C11orf74Q86VG3 221 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 LINC00301Q8NCQ3 95 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 OLIG1Q8TAK6 271 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 LRRC27Q9C0I9 530 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 ELOVL4Q9GZR5 314 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 GZF1Q9H116 711 aaPredicted RBP18.59■□□□□ 0.57
RETREG3-212ENST00000593251 TMEM9BQ9NQ34 198 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 ARHGEF4Q9NR80 690 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 TFIP11Q9UBB9 837 aaKnown RBP18.59■□□□□ 0.57
RETREG3-212ENST00000593251 NXF1Q9UBU9 619 aaKnown RBP18.59■□□□□ 0.57
RETREG3-212ENST00000593251 CHD6Q8TD26 2715 aa18.59■□□□□ 0.57
RETREG3-212ENST00000593251 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 CDX4O14627 284 aaPredicted RBP18.58■□□□□ 0.56
RETREG3-212ENST00000593251 ADH5P11766 374 aa18.58■□□□□ 0.56
RETREG3-212ENST00000593251 SPINK2P20155 84 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms