RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 OTUD4Q01804 1114 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 STX5Q13190 355 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 GRM1Q13255 1194 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 TMED1Q13445 227 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 INPP5AQ14642 412 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ECM1Q16610 540 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ARL13BQ3SXY8 428 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ADGRD1Q6QNK2 874 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 VSTM1Q6UX27 236 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 CBWD2Q8IUF1 395 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 NDUFAF2Q8N183 169 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 TAS1R2Q8TE23 839 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ZNF483Q8TF39 744 aaPredicted RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 GIPC2Q8TF65 315 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PPWD1Q96BP3 646 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 FAXDC2Q96IV6 333 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 BTBD6Q96KE9 485 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 HEXIM2Q96MH2 286 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 SLITRK1Q96PX8 696 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 BTBD9Q96Q07 612 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 CNPY3Q9BT09 278 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 TRIM62Q9BVG3 475 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ASCC2Q9H1I8 757 aaPredicted RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 CYP3A43Q9HB55 503 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 AGO4Q9HCK5 861 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 TIMMDC1Q9NPL8 285 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 IRAK4Q9NWZ3 460 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ATXN10Q9UBB4 475 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 VTI1BQ9UEU0 232 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 SUN2Q9UH99 717 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ZNF180Q9UJW8 692 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PNMA3Q9UL41 463 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 MROH7Q68CQ1 1323 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PABPN1LA6NDY0 278 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 DCDC2CA8MYV0 355 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PI4K2BG5E9Z4 385 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 EML1O00423 815 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 KLF11O14901 512 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 GSC2O15499 205 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 KCNN4O15554 427 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 TIMM44O43615 452 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 OAS1P00973 400 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 POLBP06746 335 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 UBTFL6P0CB48 400 aaPredicted RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 IL10P22301 178 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PRDX6P30041 224 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ATICP31939 592 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PHKA2P46019 1235 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 NR2C2P49116 596 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 VAC14Q08AM6 782 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 DSG2Q14126 1118 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 EFTUD2Q15029 972 aaKnown RBP eCLIP3.67□□□□□ -1.824e-29■■□□□ 12.2
VMP1-216ENST00000592790 VPS72Q15906 364 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 GEN1Q17RS7 908 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 FAM102AQ5T9C2 384 aaPredicted RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 TLDC1Q6P9B6 456 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 B3GNT6Q6ZMB0 384 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 BBS12Q6ZW61 710 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ARMCX2Q7L311 632 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 OTOAQ7RTW8 1153 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 RTKN2Q8IZC4 609 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 DNAAF3Q8N9W5 541 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 FBXO22Q8NEZ5 403 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 TNIP2Q8NFZ5 429 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 NKX2-3Q8TAU0 364 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 VPS39Q96JC1 886 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PHOX2BQ99453 314 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ECSITQ9BQ95 431 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 MRPL1Q9BYD6 325 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 MRPS26Q9BYN8 205 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 SLC13A1Q9BZW2 595 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 EFCAB1Q9HAE3 211 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 CDHR5Q9HBB8 845 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 C8orf4Q9NR00 106 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 NMRK1Q9NWW6 199 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 TAS2R14Q9NYV8 317 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 STAP1Q9ULZ2 295 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PRPF19Q9UMS4 504 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 DLEC1Q9Y238 1755 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 SNED1Q8TER0 1413 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 KANSL1LA0AUZ9 987 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ADCY3O60266 1144 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ECE2O60344 883 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 TM7SF2O76062 418 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 CBX6O95503 412 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ERBB2P04626 1255 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 MPOP05164 745 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ANPEPP15144 967 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 GSTT1P30711 240 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 CHKAP35790 457 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 ACADSBP45954 432 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 RPL5P46777 297 aaKnown RBP3.67□□□□□ -1.82
VMP1-216ENST00000592790 SERPINB8P50452 374 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 CHN2P52757 468 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 AQP5P55064 265 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PHEXP78562 749 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 OCA2Q04671 838 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 PPP3CAQ08209 521 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 GRIK3Q13003 919 aa3.67□□□□□ -1.82
VMP1-216ENST00000592790 EMC2Q15006 297 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms