RNA–Protein interactions for RNA: ENST00000592604.5

SMARCA4-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best)

Gene SMARCA4, Length 2,940 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-219ENST00000592604 NIF3L1Q9GZT8 377 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 RNF146Q9NTX7 359 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 DLGAP2Q9P1A6 1054 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 TRPC5Q9UL62 973 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 RIPK3Q9Y572 518 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 F8W8V4 182 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 SMIM24O75264 130 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 INHBAP08476 426 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 SUPT20HL2P0C7V6 817 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 PYGBP11216 843 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 RCN2Q14257 317 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 SUPT20HL1Q3ZLR7 823 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 KCNT1Q5JUK3 1230 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 SLC30A9Q6PML9 568 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 TSHZ1Q6ZSZ6 1077 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 TTC7BQ86TV6 843 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 FAM71DQ8N9W8 422 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 CMASQ8NFW8 434 aaPredicted RBP15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 STMN2Q93045 179 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 KCNK4Q9NYG8 393 aa15.51■□□□□ 0.07
SMARCA4-219ENST00000592604 CAPN14A8MX76 684 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 VWA5AO00534 786 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 RAD17O75943 681 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 POLR2BP30876 1174 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 EIF3EP60228 445 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 MYL6P60660 151 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 PTPN20Q4JDL3 420 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 TMPRSS6Q8IU80 811 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 PPFIBP2Q8ND30 876 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 JOSD2Q8TAC2 188 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 NSUN6Q8TEA1 469 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 NMUR2Q9GZQ4 415 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 SCOCQ9UIL1 159 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 FER1L6Q2WGJ9 1857 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 FAM237BA0A1B0GVD1 139 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 KBTBD13C9JR72 458 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 GSTA2P09210 222 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 CD48P09326 243 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 PGM1P36871 562 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 RFC5P40937 340 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 BASP1P80723 227 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 SP4Q02446 784 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 SEZ6Q53EL9 994 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 ZNF394Q53GI3 561 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 TAB3Q8N5C8 712 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 GATA6Q92908 595 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 C7orf26Q96N11 449 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 LHX5Q9H2C1 402 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 PARP14Q460N5 1801 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 C1QAP02745 245 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 RBP3P10745 1247 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 STIP1P31948 543 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 PAPOLAP51003 745 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 MTM1Q13496 603 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 KCNJ11Q14654 390 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 ARMC3Q5W041 872 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 AP1ARQ63HQ0 302 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 PAPOLBQ9NRJ5 636 aaKnown RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 PPME1Q9Y570 386 aa15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 MAFBQ9Y5Q3 323 aaPredicted RBP15.5■□□□□ 0.07
SMARCA4-219ENST00000592604 SPATA31C2B4DYI2 1134 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 E5RJQ4 531 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 MCF2LO15068 1137 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 MAP3K13O43283 966 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 FAM189A1O60320 539 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 YWHAEP62258 255 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 CDK18Q07002 472 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 HSF5Q4G112 596 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 TTC39BQ5VTQ0 682 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 DENND1BQ6P3S1 775 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 SLC26A11Q86WA9 606 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 RFX6Q8HWS3 928 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 TRIM42Q8IWZ5 723 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 PDCD7Q8N8D1 485 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 CCDC110Q8TBZ0 833 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 METTL5Q9NRN9 209 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 KRT82Q9NSB4 513 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 C2orf71A6NGG8 1288 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 THOC5Q13769 683 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 WDR78Q5VTH9 848 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 DTX3LQ8TDB6 740 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 ZBTB10Q96DT7 871 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 ZBED3Q96IU2 234 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 SRPK1Q96SB4 655 aaKnown RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 RPAP3Q9H6T3 665 aaPredicted RBP15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 ZNF180Q9UJW8 692 aa15.49■□□□□ 0.07
SMARCA4-219ENST00000592604 MAGEA13PA6NCF6 341 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 B2RBV5 119 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 COPEO14579 308 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 MAP3K7O43318 606 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 ITGBL1O95965 494 aaPredicted RBP15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 OATP04181 439 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 GNAT1P11488 350 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 TNFSF9P41273 254 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 GNPTABQ3T906 1256 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 ZPBP2Q6X784 338 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 MFN1Q8IWA4 741 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 GALNT15Q8N3T1 639 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 KCTD6Q8NC69 237 aa15.48■□□□□ 0.07
SMARCA4-219ENST00000592604 MTMR12Q9C0I1 747 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms