RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 KRT5P13647 590 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 PTMSP20962 102 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 ACO1P21399 889 aaKnown RBP10.65□□□□□ -0.7
BRCA1-227ENST00000591849 WEE1P30291 646 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 USP8P40818 1118 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 RAD23BP54727 409 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 PTPN5P54829 565 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 MFAP3P55082 362 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 STX1AQ16623 288 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 GOLGA7BQ2TAP0 167 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 PPP1R26Q5T8A7 1209 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-227ENST00000591849 ZNF852Q6ZMS4 543 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 TPRG1Q6ZUI0 275 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 SLC4A11Q8NBS3 891 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 ANKRD20A12PQ8NF67 263 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 SCAMP5Q8TAC9 235 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 TTC8Q8TAM2 541 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 OVCA2Q8WZ82 227 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 DNASE1L2Q92874 299 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 USP13Q92995 863 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-227ENST00000591849 FAM81BQ96LP2 452 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 DUSP16Q9BY84 665 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 UBE2TQ9NPD8 197 aaPredicted RBP10.65□□□□□ -0.7
BRCA1-227ENST00000591849 TLR8Q9NR97 1041 aaKnown RBP10.65□□□□□ -0.7
BRCA1-227ENST00000591849 HEBP1Q9NRV9 189 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 GKN1Q9NS71 199 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 GCNT4Q9P109 453 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 SIT1Q9Y3P8 196 aa10.65□□□□□ -0.7
BRCA1-227ENST00000591849 DOCK6Q96HP0 2047 aa10.65□□□□□ -0.71
BRCA1-227ENST00000591849 TSC2P49815 1807 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 C2orf78A6NCI8 922 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 ZNF840PA6NDX5 716 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 FAM170BA6NMN3 283 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 KCNJ18B7U540 433 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 NCAM2O15394 837 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 BEST1O76090 585 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 PRAMEF12O95522 483 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 NPR3P17342 541 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 PFKLP17858 780 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 CDK11BP21127 795 aaKnown RBP10.64□□□□□ -0.71
BRCA1-227ENST00000591849 IFNAR2P48551 515 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 KCNJ12Q14500 433 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 MAN2A1Q16706 1144 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 EXOC3L4Q17RC7 722 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 HECTD3Q5T447 861 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 ARHGAP17Q68EM7 881 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 PHLDB3Q6NSJ2 640 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 CAVIN1Q6NZI2 390 aaKnown RBP10.64□□□□□ -0.71
BRCA1-227ENST00000591849 CLEC20AQ6ZU45 233 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 ARHGEF19Q8IW93 802 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 ANKRD52Q8NB46 1076 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 ENOX1Q8TC92 643 aaKnown RBP10.64□□□□□ -0.71
BRCA1-227ENST00000591849 RSPRY1Q96DX4 576 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 MED15Q96RN5 788 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 NELL2Q99435 816 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 TUBGCP2Q9BSJ2 902 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 NAT10Q9H0A0 1025 aaKnown RBP10.64□□□□□ -0.71
BRCA1-227ENST00000591849 C8orf33Q9H7E9 229 aaPredicted RBP10.64□□□□□ -0.71
BRCA1-227ENST00000591849 CSNK1G1Q9HCP0 422 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 TMEM30AQ9NV96 361 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 GMIPQ9P107 970 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 NFE2L3Q9Y4A8 694 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 PIAS3Q9Y6X2 628 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 CFAP54Q96N23 3096 aa10.64□□□□□ -0.71
BRCA1-227ENST00000591849 USP34Q70CQ2 3546 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 KANSL1LA0AUZ9 987 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 TNFRSF10BO14763 440 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 TADA3O75528 432 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 PAEPP09466 180 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 RALAP11233 206 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 GLULP15104 373 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 AOC1P19801 751 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 CD72P21854 359 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 BCAT1P54687 386 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 VCPP55072 806 aaKnown RBP10.63□□□□□ -0.71
BRCA1-227ENST00000591849 STARD6P59095 220 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 AMPD2Q01433 879 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 GCNT1Q02742 428 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 FCHO2Q0JRZ9 810 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 NR1H3Q13133 447 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 ZNF268Q14587 947 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-227ENST00000591849 PDGFRLQ15198 375 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 STILQ15468 1287 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 ARHGAP44Q17R89 818 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 ITPRIPL2Q3MIP1 535 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 VWA3BQ502W6 1294 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 ENOSF1Q7L5Y1 443 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 IRF2BP1Q8IU81 584 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 RBBP8NLQ8NC74 664 aaPredicted RBP10.63□□□□□ -0.71
BRCA1-227ENST00000591849 ZMIZ2Q8NF64 920 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 LMO3Q8TAP4 145 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 UBA3Q8TBC4 463 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 SH3RF2Q8TEC5 729 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 FAM3CQ92520 227 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 KAT5Q92993 513 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 EXOC4Q96A65 974 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 ZFYVE19Q96K21 471 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 NDST4Q9H3R1 872 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 LRRC4Q9HBW1 653 aa10.63□□□□□ -0.71
BRCA1-227ENST00000591849 TRPV5Q9NQA5 729 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms