RNA–Protein interactions for RNA: ENST00000591584.1

VPS25-206, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-206ENST00000591584 ATP5DP30049 168 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 ACTN2P35609 894 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 FLT3P36888 993 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 THPOP40225 353 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 LMAN1P49257 510 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 ZNF844Q08AG5 666 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 ITGA7Q13683 1181 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 MORF4L2Q15014 288 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 OASLQ15646 514 aaKnown RBP10.88□□□□□ -0.67
VPS25-206ENST00000591584 CCDC14Q49A88 953 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 TTMPQ5BVD1 217 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 KAZNQ674X7 775 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 CYP4F22Q6NT55 531 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 C4orf22Q6V702 233 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 STRADAQ7RTN6 431 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 DOCK3Q8IZD9 2030 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 EMC1Q8N766 993 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 B3GALNT2Q8NCR0 500 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 ARRDC4Q8NCT1 418 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 CENPIQ92674 756 aaPredicted RBP10.88□□□□□ -0.67
VPS25-206ENST00000591584 ARL8AQ96BM9 186 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 PGM2Q96G03 612 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 TTC25Q96NG3 672 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 CAPS2Q9BXY5 557 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 ARHGAP39Q9C0H5 1083 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 ZWILCHQ9H900 591 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 CNOT10Q9H9A5 744 aaKnown RBP10.88□□□□□ -0.67
VPS25-206ENST00000591584 PPCSQ9HAB8 311 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 CDH9Q9ULB4 789 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 TPX2Q9ULW0 747 aaKnown RBP10.88□□□□□ -0.67
VPS25-206ENST00000591584 NOD1Q9Y239 953 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 R3HDM2Q9Y2K5 976 aaKnown RBP10.88□□□□□ -0.67
VPS25-206ENST00000591584 PTCH2Q9Y6C5 1203 aa10.88□□□□□ -0.67
VPS25-206ENST00000591584 SCN10AQ9Y5Y9 1956 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 PI4K2BG5E9Z4 385 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 DNALI1O14645 258 aaPredicted RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 KIF3CO14782 793 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 MCF2LO15068 1137 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 SPTLC1O15269 473 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 INPPL1O15357 1258 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 PAPSS1O43252 624 aaPredicted RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 RIPK2O43353 540 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 CST8O60676 142 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 TCEA3O75764 348 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 EOMESO95936 686 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 FGFR1P11362 822 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 COL6A1P12109 1028 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 KRT10P13645 584 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 NR1D1P20393 614 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 IL1R2P27930 398 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 MAP2K2P36507 400 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 ARSEP51690 589 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 ITGA8P53708 1063 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 SOX4Q06945 474 aaPredicted RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 GRIK3Q13003 919 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 KRT81Q14533 505 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 DSC3Q14574 896 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 KRT71Q3SY84 523 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 DAB2IPQ5VWQ8 1189 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 HIBCHQ6NVY1 386 aaPredicted RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 DSTYKQ6XUX3 929 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 BZW1Q7L1Q6 419 aaKnown RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 METTL23Q86XA0 190 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 RFX6Q8HWS3 928 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 ZCCHC9Q8N567 271 aaKnown RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 TRAF3IP1Q8TDR0 691 aaPredicted RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 RSAD2Q8WXG1 361 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 ATG4AQ8WYN0 398 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 HAUS1Q96CS2 278 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 SENP8Q96LD8 212 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 GLT1D1Q96MS3 346 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 ZIC5Q96T25 663 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 ZNF670Q9BS34 389 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 HERPUD2Q9BSE4 406 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 DDX23Q9BUQ8 820 aaKnown RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 RRN3Q9NYV6 651 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.87□□□□□ -0.67
VPS25-206ENST00000591584 CWC15Q9P013 229 aaKnown RBP10.87□□□□□ -0.67
VPS25-206ENST00000591584 TJP2Q9UDY2 1190 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 DNPEPQ9ULA0 475 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 PADI3Q9ULW8 664 aa10.87□□□□□ -0.67
VPS25-206ENST00000591584 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.86□□□□□ -0.67
VPS25-206ENST00000591584 ARL5CA6NH57 179 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 EIF3HO15372 352 aaKnown RBP eCLIP10.86□□□□□ -0.67
VPS25-206ENST00000591584 TTC4O95801 387 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 AGTP01019 485 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 PDGFRBP09619 1106 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 TCF4P15884 667 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 NPR3P17342 541 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 LMO2P25791 158 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 CCND3P30281 292 aaPredicted RBP10.86□□□□□ -0.67
VPS25-206ENST00000591584 NR2C2P49116 596 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 RGS7P49802 495 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 AIF1P55008 147 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 CDH6P55285 790 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 SLC29A2Q14542 456 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 MAPRE1Q15691 268 aaKnown RBP10.86□□□□□ -0.67
VPS25-206ENST00000591584 ERMARDQ5T6L9 678 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 IZUMO3Q5VZ72 239 aa10.86□□□□□ -0.67
VPS25-206ENST00000591584 TXNRD3NBQ6F5E7 133 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms