RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 SPATA2LQ8IUW3 424 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 KDF1Q8NAX2 398 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 USP13Q92995 863 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 TRMT2BQ96GJ1 504 aaKnown RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 FUBP3Q96I24 572 aaKnown RBP eCLIP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 CEP295NLQ96MC4 621 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 FAM213AQ9BRX8 229 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 ARRDC1-AS1Q9H2J1 176 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 EBF3Q9H4W6 596 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 TMEM206Q9H813 350 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 ZFAND3Q9H8U3 227 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 VPS45Q9NRW7 570 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 BLOC1S4Q9NUP1 217 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 DDX43Q9NXZ2 648 aaKnown RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 RBAKQ9NYW8 714 aaPredicted RBP10.11□□□□□ -0.79
BRCA1-226ENST00000591534 SEPT3Q9UH03 358 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 ITGA11Q9UKX5 1188 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 CITO14578 2027 aa10.11□□□□□ -0.79
BRCA1-226ENST00000591534 KIAA0391O15091 583 aaKnown RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 EXTL3O43909 919 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 APBB3O95704 486 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 CKMP06732 381 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 HMGA1P17096 107 aaKnown RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 PFKLP17858 780 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 GARTP22102 1010 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 CEBPZQ03701 1054 aaKnown RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 MTF1Q14872 753 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 SURF1Q15526 300 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 ST3GAL2Q16842 350 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 L1TD1Q5T7N2 865 aaKnown RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 TXNDC8Q6A555 127 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 CCDC73Q6ZRK6 1079 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 SND1Q7KZF4 910 aaKnown RBP eCLIP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 DPH6Q7L8W6 267 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 DYMQ7RTS9 669 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 LRRTM3Q86VH5 581 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 BRSK2Q8IWQ3 736 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 CYP4X1Q8N118 509 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 CSGALNACT2Q8N6G5 542 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 TOP6BLQ8N6T0 577 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 OSCP1Q8WVF1 389 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 SCG3Q8WXD2 468 aaKnown RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 ZC3H10Q96K80 434 aaKnown RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 MYRFLQ96LU7 910 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 CLIC6Q96NY7 704 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 FIZ1Q96SL8 496 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 PI4K2AQ9BTU6 479 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 LRRC27Q9C0I9 530 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 SMG9Q9H0W8 520 aaKnown RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 TSPAN10Q9H1Z9 355 aaPredicted RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 TRPC7Q9HCX4 862 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 DUS2Q9NX74 493 aaKnown RBP10.1□□□□□ -0.79
BRCA1-226ENST00000591534 ANGPTL2Q9UKU9 493 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 AGAP1Q9UPQ3 857 aa10.1□□□□□ -0.79
BRCA1-226ENST00000591534 PDCD11Q14690 1871 aaKnown RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 NOL4O94818 638 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 GCNT3O95395 438 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 NFATC1O95644 943 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 ABL1P00519 1130 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 IL2RAP01589 272 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 ITGB3P05106 788 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 KRT19P08727 400 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 TMEM191BP0C7N4 346 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 POLR2BP30876 1174 aaKnown RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 RAP1GAPP47736 663 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 PPP3CCP48454 512 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 GALK1P51570 392 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 WDR4P57081 412 aaKnown RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 PKP1Q13835 747 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 KCNB1Q14721 858 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 CFAP221Q4G0U5 840 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 USP39Q53GS9 565 aaKnown RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 FOXD4L5Q5VV16 416 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 FSTL4Q6MZW2 842 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 SYT13Q7L8C5 426 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 SFR1Q86XK3 245 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 TMEM130Q8N3G9 435 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 PDCL2Q8N4E4 241 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 KIAA1958Q8N8K9 716 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 C1orf216Q8TAB5 229 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 FOXD4L4Q8WXT5 416 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 CD101Q93033 1021 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 ANKRD36BP1Q96IX9 119 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 EPSTI1Q96J88 318 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 USP28Q96RU2 1077 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 KLF16Q9BXK1 252 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 ECT2Q9H8V3 914 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 HPS4Q9NQG7 708 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 OLFML3Q9NRN5 406 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 GDAP2Q9NXN4 497 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 EBF1Q9UH73 591 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 CCL26Q9Y258 94 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 SNX9Q9Y5X1 595 aa10.09□□□□□ -0.79
BRCA1-226ENST00000591534 MORC2Q9Y6X9 1032 aaPredicted RBP10.09□□□□□ -0.79
BRCA1-226ENST00000591534 EGFP01133 1207 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 TNNC2P02585 160 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 IDEP14735 1019 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 HDCP19113 662 aa10.08□□□□□ -0.8
BRCA1-226ENST00000591534 CYP2F1P24903 491 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms