RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 PIRO00625 290 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 IKBKBO14920 756 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 FSCN2O14926 492 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 SYN3O14994 580 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 C4BPAP04003 597 aaKnown RBP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 CTSAP10619 480 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 ATP1A3P13637 1013 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 P4HA1P13674 534 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 CD58P19256 250 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 GTF2H1P32780 548 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 NRIP1P48552 1158 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 AARSP49588 968 aaKnown RBP eCLIP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 SMCPP49901 116 aaPredicted RBP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 CDR1P51861 262 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 NRLP54845 237 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 ERVFC1P60507 584 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 RPS26P62854 115 aaKnown RBP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 CREMQ03060 361 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 YWHAHQ04917 246 aaPredicted RBP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 ENPEPQ07075 957 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 CETN1Q12798 172 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 LRMPQ12912 555 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 KRT31Q15323 416 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 WDR72Q3MJ13 1102 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 CTXN3Q4LDR2 81 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 TCP11X2Q5H9J9 407 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 TCEAL5Q5H9L2 206 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 RPS26P11Q5JNZ5 115 aaPredicted RBP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 WSCD1Q658N2 575 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 PDXDC1Q6P996 788 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 C15orf39Q6ZRI6 1047 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 RBM23Q86U06 439 aaKnown RBP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 IRF2BP1Q8IU81 584 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 SLITRK4Q8IW52 837 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 PDCL2Q8N4E4 241 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 FBXL13Q8NEE6 735 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 APPL2Q8NEU8 664 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 SEMA4DQ92854 862 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 ANAPC16Q96DE5 110 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 BORCS6Q96GS4 357 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 SHDQ96IW2 340 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 BPIFA3Q9BQP9 254 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 TUBGCP2Q9BSJ2 902 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 CRACR2AQ9BSW2 395 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 EMILIN2Q9BXX0 1053 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 TRIM55Q9BYV6 548 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 VPS16Q9H269 839 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 SNX25Q9H3E2 840 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 NSUN3Q9H649 340 aaKnown RBP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 IGFLR1Q9H665 355 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 TLE6Q9H808 572 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 NGRNQ9NPE2 291 aaKnown RBP6.84□□□□□ -1.31
VPS4B-205ENST00000591383 MTMR10Q9NXD2 777 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 PRKAG3Q9UGI9 489 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 L1RE1Q9UN81 338 aa6.84□□□□□ -1.31
VPS4B-205ENST00000591383 SLC35F4A4IF30 521 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 C2orf71A6NGG8 1288 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 LGALS16A8MUM7 142 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 H7C4K7 107 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 M0QZQ0 153 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 PDE2AO00408 941 aaPredicted RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 PER2O15055 1255 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 TEX28O15482 410 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 HCRTO43612 131 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 MAN1A2O60476 641 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 CXCL14O95715 111 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 GLUD1P00367 558 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 ASS1P00966 412 aaKnown RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 CNPP09543 421 aaKnown RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 OR4Q2P0C623 313 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 TYMPP19971 482 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 FGFR3P22607 806 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 ACAT1P24752 427 aaKnown RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 HSD3B2P26439 372 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 KLRC2P26717 231 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 ATICP31939 592 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 ASPAP45381 313 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 NDUFV1P49821 464 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 COPB1P53618 953 aaKnown RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 ZNF445P59923 1031 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 PSMC1P62191 440 aaKnown RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 TSPY1Q01534 308 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 DSG1Q02413 1049 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 CAMK1Q14012 370 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 NCAPHQ15003 741 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 DBN1Q16643 649 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 VWA3BQ502W6 1294 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 FKBP15Q5T1M5 1219 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 CD300LGQ6UXG3 332 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 GBP6Q6ZN66 633 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 TRIM42Q8IWZ5 723 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 RNF168Q8IYW5 571 aaPredicted RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 TMEM86AQ8N2M4 240 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 PPM1KQ8N3J5 372 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 TOP6BLQ8N6T0 577 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 CXorf38Q8TB03 319 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 NT5C1BQ96P26 610 aa6.83□□□□□ -1.32
VPS4B-205ENST00000591383 SRPK1Q96SB4 655 aaKnown RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 LSM14BQ9BX40 385 aaKnown RBP6.83□□□□□ -1.32
VPS4B-205ENST00000591383 XYLT2Q9H1B5 865 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms