RNA–Protein interactions for RNA: ENST00000590830.5

MBD3-208, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best)

Gene MBD3, Length 1,035 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-208ENST00000590830 NUP210Q8TEM1 1887 aaPredicted RBP23.67■■□□□ 1.38
MBD3-208ENST00000590830 RTN3O95197 1032 aaPredicted RBP23.67■■□□□ 1.38
MBD3-208ENST00000590830 USP17L7P0C7H9 530 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 TARSP26639 723 aaKnown RBP23.67■■□□□ 1.38
MBD3-208ENST00000590830 SOX9P48436 509 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 PGFP49763 221 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 CLEC20AQ6ZU45 233 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 GPRIN1Q7Z2K8 1008 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 PRRX2Q99811 253 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 FAM83CQ9BQN1 747 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 GTSE1Q9NYZ3 720 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 PIAS3Q9Y6X2 628 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 COL4A2P08572 1712 aa23.67■■□□□ 1.38
MBD3-208ENST00000590830 FAM92AA1XBS5 289 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 P4HA2O15460 535 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 CKMP06732 381 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 FAM200BP0CF97 657 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 PPP3CCP48454 512 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 UBXN2BQ14CS0 331 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 ZNF852Q6ZMS4 543 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 TTC39CQ8N584 583 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 EHBP1Q8NDI1 1231 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 KAT5Q92993 513 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 FAM124BQ9H5Z6 455 aaPredicted RBP23.66■■□□□ 1.38
MBD3-208ENST00000590830 KIF9Q9HAQ2 790 aa23.66■■□□□ 1.38
MBD3-208ENST00000590830 UTP18Q9Y5J1 556 aaKnown RBP eCLIP23.66■■□□□ 1.38
MBD3-208ENST00000590830 FGFR1OPO95684 399 aaKnown RBP23.65■■□□□ 1.38
MBD3-208ENST00000590830 ABL1P00519 1130 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 AFPP02771 609 aaKnown RBP23.65■■□□□ 1.38
MBD3-208ENST00000590830 CCDC192P0DO97 292 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 PLA2G5P39877 138 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 NHLH1Q02575 133 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 ZNF77Q15935 545 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 TRIM68Q6AZZ1 485 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 CSGALNACT1Q8TDX6 532 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 FBXO32Q969P5 355 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 SLITRK1Q96PX8 696 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 DUSP16Q9BY84 665 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 OSBPL6Q9BZF3 934 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 HPS4Q9NQG7 708 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 THG1LQ9NWX6 298 aaKnown RBP23.65■■□□□ 1.38
MBD3-208ENST00000590830 COMMD8Q9NX08 183 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 ARHGAP26Q9UNA1 814 aa23.65■■□□□ 1.38
MBD3-208ENST00000590830 OTOL1A6NHN0 477 aaPredicted RBP23.64■■□□□ 1.37
MBD3-208ENST00000590830 H0Y858 1186 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 OLFM2O95897 454 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 OAS1P00973 400 aaKnown RBP23.64■■□□□ 1.37
MBD3-208ENST00000590830 ZDHHC11BP0C7U3 371 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 ACO1P21399 889 aaKnown RBP23.64■■□□□ 1.37
MBD3-208ENST00000590830 PTPN5P54829 565 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 MLLT6P55198 1093 aaPredicted RBP23.64■■□□□ 1.37
MBD3-208ENST00000590830 PLCB2Q00722 1185 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 SNX30Q5VWJ9 437 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 ARHGEF19Q8IW93 802 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 SH3RF2Q8TEC5 729 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 OVCA2Q8WZ82 227 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 JAKMIP2Q96AA8 810 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 CNOT6LQ96LI5 555 aaKnown RBP23.64■■□□□ 1.37
MBD3-208ENST00000590830 NT5C1BQ96P26 610 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 NELL2Q99435 816 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 GMIPQ9P107 970 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 ANAPC1Q9H1A4 1944 aa23.64■■□□□ 1.37
MBD3-208ENST00000590830 F5P12259 2224 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 MAN2B1O00754 1011 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 ARSAP15289 507 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 PFKLP17858 780 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 KPNA1P52294 538 aaPredicted RBP23.63■■□□□ 1.37
MBD3-208ENST00000590830 USP4Q13107 963 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 ARHGAP17Q68EM7 881 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 TXNDC11Q6PKC3 985 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 FAM3CQ92520 227 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 CLDN23Q96B33 292 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 FAM122AQ96E09 287 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 NDRG2Q9UN36 371 aaKnown RBP23.63■■□□□ 1.37
MBD3-208ENST00000590830 TICRRQ7Z2Z1 1910 aa23.63■■□□□ 1.37
MBD3-208ENST00000590830 RNF225M0QZC1 329 aaPredicted RBP23.62■■□□□ 1.37
MBD3-208ENST00000590830 TCF3P15923 654 aa23.62■■□□□ 1.37
MBD3-208ENST00000590830 TRIM21P19474 475 aaKnown RBP23.62■■□□□ 1.37
MBD3-208ENST00000590830 TBXAS1P24557 533 aaPredicted RBP23.62■■□□□ 1.37
MBD3-208ENST00000590830 SLC7A9P82251 487 aa23.62■■□□□ 1.37
MBD3-208ENST00000590830 MTF1Q14872 753 aa23.62■■□□□ 1.37
MBD3-208ENST00000590830 RRAGAQ7L523 313 aa23.62■■□□□ 1.37
MBD3-208ENST00000590830 TTC16Q8NEE8 873 aa23.62■■□□□ 1.37
MBD3-208ENST00000590830 PDZD8Q8NEN9 1154 aa23.62■■□□□ 1.37
MBD3-208ENST00000590830 CHFRQ96EP1 664 aa23.62■■□□□ 1.37
MBD3-208ENST00000590830 INTS2Q9H0H0 1204 aaKnown RBP23.62■■□□□ 1.37
MBD3-208ENST00000590830 EBF3Q9H4W6 596 aa23.62■■□□□ 1.37
MBD3-208ENST00000590830 C8orf33Q9H7E9 229 aaPredicted RBP23.62■■□□□ 1.37
MBD3-208ENST00000590830 ZNF638Q14966 1978 aaKnown RBP23.61■■□□□ 1.37
MBD3-208ENST00000590830 SPECC1L-ADORA2AF8WAN1 911 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 LEFTY2O00292 366 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 ERCC5P28715 1186 aaPredicted RBP23.61■■□□□ 1.37
MBD3-208ENST00000590830 CETN1Q12798 172 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 ITPRIPL2Q3MIP1 535 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 RBM43Q6ZSC3 357 aaKnown RBP23.61■■□□□ 1.37
MBD3-208ENST00000590830 TTC30AQ86WT1 665 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 CREBRFQ8IUR6 639 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 PPM1KQ8N3J5 372 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 KREMEN1Q96MU8 473 aa23.61■■□□□ 1.37
MBD3-208ENST00000590830 PHOX2BQ99453 314 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms