RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 SHKBP1Q8TBC3 707 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 FGF14Q92915 247 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 DUSP9Q99956 384 aaKnown RBP11.04□□□□□ -0.64
SDF2-208ENST00000589788 KXD1Q9BQD3 176 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 LRRC3Q9BY71 257 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 GPR88Q9GZN0 384 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 DNAI2Q9GZS0 605 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 ATXN3LQ9H3M9 355 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 SMOC2Q9H3U7 446 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 DPEP3Q9H4B8 488 aa11.04□□□□□ -0.64
SDF2-208ENST00000589788 ZNF334Q9HCZ1 680 aaPredicted RBP11.04□□□□□ -0.64
SDF2-208ENST00000589788 MAGED2Q9UNF1 606 aaPredicted RBP11.04□□□□□ -0.64
SDF2-208ENST00000589788 TECTAO75443 2155 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 ATP8B3O60423 1300 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 NARSO43776 548 aaKnown RBP11.03□□□□□ -0.64
SDF2-208ENST00000589788 GNA14O95837 355 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 SRFP11831 508 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 BDNFP23560 247 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 CDC25CP30307 473 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 GRIK1P39086 918 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 GPR15P49685 360 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 DHX9Q08211 1270 aaKnown RBP11.03□□□□□ -0.64
SDF2-208ENST00000589788 DDR2Q16832 855 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 FAM78AQ5JUQ0 283 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 VSTM1Q6UX27 236 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 RBM43Q6ZSC3 357 aaKnown RBP11.03□□□□□ -0.64
SDF2-208ENST00000589788 HFE2Q6ZVN8 426 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 GAREM2Q75VX8 874 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 MLKLQ8NB16 471 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 SMARCD2Q92925 531 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 PCED1BQ96HM7 432 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 MED10Q9BTT4 135 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 ELOVL4Q9GZR5 314 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 NIF3L1Q9GZT8 377 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 SDCBP2Q9H190 292 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 MFSD1Q9H3U5 465 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 CYP3A43Q9HB55 503 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 ZFP14Q9HCL3 533 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 RAB20Q9NX57 234 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 PLA2G2EQ9NZK7 142 aa11.03□□□□□ -0.64
SDF2-208ENST00000589788 UXTQ9UBK9 157 aaPredicted RBP11.03□□□□□ -0.64
SDF2-208ENST00000589788 SPTBN5Q9NRC6 3674 aaKnown RBP11.02□□□□□ -0.64
SDF2-208ENST00000589788 PTPRDP23468 1912 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 SLC38A8A6NNN8 435 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 MOSPD3O75425 235 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ECI2O75521 394 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 LETM1O95202 739 aaPredicted RBP11.02□□□□□ -0.65
SDF2-208ENST00000589788 SCNN1AP37088 669 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ASPAP45381 313 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 NDST1P52848 882 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 GPR158Q5T848 1215 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ACOT1Q86TX2 421 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 UNC93AQ86WB7 457 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 SUGP1Q8IWZ8 645 aaKnown RBP11.02□□□□□ -0.65
SDF2-208ENST00000589788 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.02□□□□□ -0.65
SDF2-208ENST00000589788 TSEN2Q8NCE0 465 aaKnown RBP11.02□□□□□ -0.65
SDF2-208ENST00000589788 STKLD1Q8NE28 680 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ZSCAN18Q8TBC5 510 aaPredicted RBP11.02□□□□□ -0.65
SDF2-208ENST00000589788 SEMA4DQ92854 862 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 SLC35C1Q96A29 364 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ELSPBP1Q96BH3 223 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ASIC4Q96FT7 647 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ZSWIM3Q96MP5 696 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ASB16Q96NS5 453 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 ANP32EQ9BTT0 268 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 RPP25Q9BUL9 199 aaKnown RBP11.02□□□□□ -0.65
SDF2-208ENST00000589788 SRRTQ9BXP5 876 aaKnown RBP11.02□□□□□ -0.65
SDF2-208ENST00000589788 BCO2Q9BYV7 579 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 APOBEC3GQ9HC16 384 aaKnown RBP11.02□□□□□ -0.65
SDF2-208ENST00000589788 ZNF358Q9NW07 568 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 DACH1Q9UI36 760 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 RWDD2AQ9UIY3 292 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 NME7Q9Y5B8 376 aa11.02□□□□□ -0.65
SDF2-208ENST00000589788 NRG2O14511 850 aaPredicted RBP11.01□□□□□ -0.65
SDF2-208ENST00000589788 PRMT3O60678 531 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 NOL4O94818 638 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 CCDC192P0DO97 292 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 HMGA1P17096 107 aaKnown RBP11.01□□□□□ -0.65
SDF2-208ENST00000589788 CD58P19256 250 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 FMO5P49326 533 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 NLRP12P59046 1061 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 CYP4F8P98187 520 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 CETN1Q12798 172 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 ORC1Q13415 861 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 TPD52L1Q16890 204 aaPredicted RBP11.01□□□□□ -0.65
SDF2-208ENST00000589788 ZSCAN23Q3MJ62 389 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 CBWD6Q4V339 395 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 CBWD3Q5JTY5 395 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 CBWD5Q5RIA9 395 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 STXBP5Q5T5C0 1151 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 TANGO2Q6ICL3 276 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 BMP8AQ7Z5Y6 402 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 CREBRFQ8IUR6 639 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 FBXL6Q8N531 539 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 TTC39CQ8N584 583 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 MRPS31Q92665 395 aaKnown RBP11.01□□□□□ -0.65
SDF2-208ENST00000589788 E2F7Q96AV8 911 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 TRMT2BQ96GJ1 504 aaKnown RBP11.01□□□□□ -0.65
SDF2-208ENST00000589788 FAXDC2Q96IV6 333 aa11.01□□□□□ -0.65
SDF2-208ENST00000589788 SPATA17Q96L03 361 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms