RNA–Protein interactions for RNA: ENST00000589753.1

ATG4D-211, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-211ENST00000589753 RTN2O75298 545 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 RFPL2O75678 378 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 GLP2RO95838 553 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 CSH1P0DML2 217 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 CSH2P0DML3 217 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 LCP1P13796 627 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 FOSL2P15408 326 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 ACADSBP45954 432 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 RPL34P49207 117 aaKnown RBP16■□□□□ 0.15
ATG4D-211ENST00000589753 SNX16P57768 344 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 TAF12Q16514 161 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 CCDC122Q5T0U0 273 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 ALKBH5Q6P6C2 394 aaKnown RBP16■□□□□ 0.15
ATG4D-211ENST00000589753 GPRIN1Q7Z2K8 1008 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 ITIH5Q86UX2 942 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 PHF13Q86YI8 300 aaPredicted RBP16■□□□□ 0.15
ATG4D-211ENST00000589753 STKLD1Q8NE28 680 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 CPXM1Q96SM3 734 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 SYNCQ9H7C4 482 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 SFXN1Q9H9B4 322 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 SPTLC3Q9NUV7 552 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 MTMR10Q9NXD2 777 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 TAS2R14Q9NYV8 317 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 NAGPAQ9UK23 515 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 PATJQ8NI35 1801 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 MYH10P35580 1976 aa16■□□□□ 0.15
ATG4D-211ENST00000589753 TRANK1O15050 2925 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 CCDC195A0A1B0GUA6 201 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 E5RJQ4 531 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 PIK3R2O00459 728 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 CCL16O15467 120 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 XYLBO75191 536 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 GABBR2O75899 941 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 RTN3O95197 1032 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-211ENST00000589753 MMP8P22894 467 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 TKTL1P51854 596 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 ADIGQ0VDE8 80 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 IFRD2Q12894 506 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-211ENST00000589753 MTMR3Q13615 1198 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 PTPN20Q4JDL3 420 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 ANKRD54Q6NXT1 300 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 RAD9BQ6WBX8 426 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 MMS22LQ6ZRQ5 1243 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 DNAJB7Q7Z6W7 309 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-211ENST00000589753 TMEM110Q86TL2 294 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 SIX6OS1Q8N1H7 587 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 SCAMP5Q8TAC9 235 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 PSMG2Q969U7 264 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 ZNF512Q96ME7 567 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-211ENST00000589753 C11orf70Q9BRQ4 267 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 PRKD2Q9BZL6 878 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 MIS12Q9H081 205 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 ISCUQ9H1K1 167 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 FBXO44Q9H4M3 255 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 COMMD8Q9NX08 183 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 CLDND1Q9NY35 253 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 EHD2Q9NZN4 543 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 ADAM22Q9P0K1 906 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 NENFQ9UMX5 172 aa15.99■□□□□ 0.15
ATG4D-211ENST00000589753 MAGED2Q9UNF1 606 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-211ENST00000589753 EPN1Q9Y6I3 576 aaPredicted RBP15.99■□□□□ 0.15
ATG4D-211ENST00000589753 EIF3CLB5ME19 914 aaKnown RBP15.98■□□□□ 0.15
ATG4D-211ENST00000589753 ARHGAP6O43182 974 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 NDUFA10O95299 355 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 FTLP02792 175 aaPredicted RBP15.98■□□□□ 0.15
ATG4D-211ENST00000589753 ERBB2P04626 1255 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 POU2F2P09086 479 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 GABRB2P47870 512 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 USP46P62068 366 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 CCZ1BP86790 482 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 CCZ1P86791 482 aaPredicted RBP15.98■□□□□ 0.15
ATG4D-211ENST00000589753 C1QBPQ07021 282 aaKnown RBP15.98■□□□□ 0.15
ATG4D-211ENST00000589753 MTF1Q14872 753 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 COL19A1Q14993 1142 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 SPA17Q15506 151 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 CTC1Q2NKJ3 1217 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 MON1BQ7L1V2 547 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 MCOLN2Q8IZK6 566 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 C12orf76Q8N812 135 aaPredicted RBP15.98■□□□□ 0.15
ATG4D-211ENST00000589753 CMASQ8NFW8 434 aaPredicted RBP15.98■□□□□ 0.15
ATG4D-211ENST00000589753 C18orf8Q96DM3 657 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 PABPC5Q96DU9 382 aaKnown RBP15.98■□□□□ 0.15
ATG4D-211ENST00000589753 EIF3CQ99613 913 aaKnown RBP15.98■□□□□ 0.15
ATG4D-211ENST00000589753 TTLL2Q9BWV7 592 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 IL37Q9NZH6 218 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 TJP2Q9UDY2 1190 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 USP3Q9Y6I4 520 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 MYO7AQ13402 2215 aa15.98■□□□□ 0.15
ATG4D-211ENST00000589753 FBXO21O94952 628 aa15.97■□□□□ 0.15
ATG4D-211ENST00000589753 IPO7O95373 1038 aaKnown RBP15.97■□□□□ 0.15
ATG4D-211ENST00000589753 PAPLNO95428 1278 aa15.97■□□□□ 0.15
ATG4D-211ENST00000589753 LCA5LO95447 670 aa15.97■□□□□ 0.15
ATG4D-211ENST00000589753 ZBED1O96006 694 aa15.97■□□□□ 0.15
ATG4D-211ENST00000589753 CALB1P05937 261 aa15.97■□□□□ 0.15
ATG4D-211ENST00000589753 HMGA1P17096 107 aaKnown RBP15.97■□□□□ 0.15
ATG4D-211ENST00000589753 HOXB8P17481 243 aaPredicted RBP15.97■□□□□ 0.15
ATG4D-211ENST00000589753 YWHAQP27348 245 aa15.97■□□□□ 0.15
ATG4D-211ENST00000589753 C2CD6Q53TS8 623 aa15.97■□□□□ 0.15
ATG4D-211ENST00000589753 RARS2Q5T160 578 aaKnown RBP15.97■□□□□ 0.15
ATG4D-211ENST00000589753 CYP4A22Q5TCH4 519 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms