RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 NUGGCQ68CJ6 796 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 CYP4F22Q6NT55 531 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 TRPM8Q7Z2W7 1104 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 TDRPQ86YL5 185 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 LRRC71Q8N4P6 559 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 KCTD6Q8NC69 237 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 NCAPGQ9BPX3 1015 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 OSBPL7Q9BZF2 842 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 DNAI2Q9GZS0 605 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 PTPRHQ9HD43 1115 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 KLC4Q9NSK0 619 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 ASNSD1Q9NWL6 643 aa7.77□□□□□ -1.17
ZNF540-206ENST00000589117 SMG5Q9UPR3 1016 aaKnown RBP7.77□□□□□ -1.17
ZNF540-206ENST00000589117 SSC5DA1L4H1 1573 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 FAM47DPA6NHR8 397 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 TCP11X1B4DZS4 312 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 ALOX15BO15296 676 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 LILRA1O75019 489 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 IFNB1P01574 187 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 HMGCRP04035 888 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 HOXC6P09630 235 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 MCF2P10911 925 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 KRT15P19012 456 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 ASPAP45381 313 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 SLC18A1P54219 525 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 ARL4CP56559 192 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 MYO1EQ12965 1108 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 LAMC2Q13753 1193 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 RASA2Q15283 850 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 STILQ15468 1287 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 DAB2IPQ5VWQ8 1189 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 FBXW10Q5XX13 1052 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 ICE2Q659A1 982 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 SCARA5Q6ZMJ2 495 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 MAP7D3Q8IWC1 876 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 PPIL6Q8IXY8 311 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 SRRM1Q8IYB3 904 aaKnown RBP7.76□□□□□ -1.17
ZNF540-206ENST00000589117 GJD3Q8N144 294 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 ANKRD42Q8N9B4 389 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 MGARPQ8TDB4 240 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 CKAP2Q8WWK9 683 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 ALKBH8Q96BT7 664 aaKnown RBP7.76□□□□□ -1.17
ZNF540-206ENST00000589117 C9orf72Q96LT7 481 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 MAGEB18Q96M61 343 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 SMC6Q96SB8 1091 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 HERPUD2Q9BSE4 406 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 BCO2Q9BYV7 579 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 XYLT2Q9H1B5 865 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 VPS37BQ9H9H4 285 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 LRRC4CQ9HCJ2 640 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 DNAJC17Q9NVM6 304 aaKnown RBP7.76□□□□□ -1.17
ZNF540-206ENST00000589117 KLHL14Q9P2G3 628 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 TBK1Q9UHD2 729 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 SLC24A2Q9UI40 661 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 ARL2BPQ9Y2Y0 163 aa7.76□□□□□ -1.17
ZNF540-206ENST00000589117 TCRBV5S1A1TA0A578 114 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 CFAP73A6NFT4 308 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 GOLGA8SH3BPF8 625 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 SNX3O60493 162 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 DNAJC8O75937 253 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 VDRP11473 427 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 STIP1P31948 543 aaKnown RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 RFC1P35251 1148 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 GSCP56915 257 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 OSTNP61366 133 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 CCNA1P78396 465 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 SEPT7Q16181 437 aaKnown RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 HIF1AQ16665 826 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 FAM187BQ17R55 369 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 ATP13A4Q4VNC1 1196 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 PYROXD1Q8WU10 500 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 TMEM176AQ96HP8 235 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 TGS1Q96RS0 853 aaKnown RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 FAM118BQ9BPY3 351 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 ADPGKQ9BRR6 497 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 ELP3Q9H9T3 547 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 RSAD1Q9HA92 442 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 KLK14Q9P0G3 267 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 FETUBQ9UGM5 382 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 TLL2Q9Y6L7 1015 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 DOCK5Q9H7D0 1870 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 DNAJC25-GNG10A0A024R161 153 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 A0A1B0GUA9 196 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 A6NJY4 79 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 ZBTB42B2RXF5 422 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 ABLIM1O14639 778 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 MCF2LO15068 1137 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 CHUKO15111 745 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 EDN1P05305 212 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 PGK2P07205 417 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 STAG3L1P0CL83 205 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 GRM5P41594 1212 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 RBP5P82980 135 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 PTPN11Q06124 597 aaPredicted RBP7.75□□□□□ -1.17
ZNF540-206ENST00000589117 PPIL2Q13356 520 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 XRCC4Q13426 336 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 TFDP2Q14188 446 aa7.75□□□□□ -1.17
ZNF540-206ENST00000589117 LRRC14Q15048 493 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms