RNA–Protein interactions for RNA: ENST00000588937.5

MBD1-217, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 1,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-217ENST00000588937 GJD2Q9UKL4 321 aa15.99■□□□□ 0.15
MBD1-217ENST00000588937 ATXN2Q99700 1313 aaKnown RBP15.99■□□□□ 0.15
MBD1-217ENST00000588937 A0A087WUV0 522 aaPredicted RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 KPNA7A9QM74 516 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 MCF2LO15068 1137 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 ECM2O94769 699 aaPredicted RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 ENDOD1O94919 500 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 IFNB1P01574 187 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 ZSCAN5DPP0CG00 497 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 CHN1P15882 459 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 AKAP5P24588 427 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 SDC4P31431 198 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 GNL1P36915 607 aaPredicted RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 TAF6P49848 677 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 CDH6P55285 790 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 CCL14Q16627 93 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 FSCN1Q16658 493 aaKnown RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 SOWAHAQ2M3V2 549 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 DEFB115Q30KQ5 88 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 RNASEH2BQ5TBB1 312 aaKnown RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 PMF1Q6P1K2 205 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 TAF2Q6P1X5 1199 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 OLFML1Q6UWY5 402 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 PRUNE1Q86TP1 453 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 VSIG1Q86XK7 387 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 CRYBG2Q8N1P7 616 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 GLIS1Q8NBF1 620 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 TEKT4Q8WW24 435 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 TBCBQ99426 244 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 CALN1Q9BXU9 219 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 CXCL16Q9H2A7 254 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 SNX25Q9H3E2 840 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 SAYSD1Q9NPB0 183 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 INTS9Q9NV88 658 aaKnown RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 CDH16O75309 829 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 AKR1A1P14550 325 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 SCNN1AP37088 669 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 ACADSBP45954 432 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 RGS7P49802 495 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 APLP1P51693 650 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 BCAT1P54687 386 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 EIF3EP60228 445 aaKnown RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 BST2Q10589 180 aaKnown RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 HIC1Q14526 733 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 KRT81Q14533 505 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 PPIL6Q8IXY8 311 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 ANKRD52Q8NB46 1076 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 ARHGEF2Q92974 986 aaKnown RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 LENG1Q96BZ8 264 aaPredicted RBP15.98■□□□□ 0.15
MBD1-217ENST00000588937 PPCSQ9HAB8 311 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.98■□□□□ 0.15
MBD1-217ENST00000588937 FAM49BQ9NUQ9 324 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 LGALS13Q9UHV8 139 aa15.98■□□□□ 0.15
MBD1-217ENST00000588937 PIK3R2O00459 728 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 TNPO2O14787 897 aaKnown RBP15.97■□□□□ 0.15
MBD1-217ENST00000588937 CD48P09326 243 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 ETS1P14921 441 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 PECAM1P16284 738 aaPredicted RBP15.97■□□□□ 0.15
MBD1-217ENST00000588937 HOXC8P31273 242 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 STIP1P31948 543 aaKnown RBP15.97■□□□□ 0.15
MBD1-217ENST00000588937 PURAQ00577 322 aaKnown RBP15.97■□□□□ 0.15
MBD1-217ENST00000588937 BEX3Q00994 111 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 CCDC14Q49A88 953 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 UBXN11Q5T124 520 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 ARCQ7LC44 396 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 EXOC3L1Q86VI1 746 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 APPL2Q8NEU8 664 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 MDM1Q8TC05 714 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 TMEM40Q8WWA1 233 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 TNIP3Q96KP6 325 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 C9orf72Q96LT7 481 aa15.97■□□□□ 0.15
MBD1-217ENST00000588937 M0QZ92 97 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 DUSP11O75319 330 aaKnown RBP15.96■□□□□ 0.15
MBD1-217ENST00000588937 FAM163BP0C2L3 166 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 CORO7P57737 925 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 ZNF200P98182 395 aaPredicted RBP15.96■□□□□ 0.15
MBD1-217ENST00000588937 PDE4CQ08493 712 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 NR1H3Q13133 447 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 CDO1Q16878 200 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 C15orf59Q2T9L4 293 aaPredicted RBP15.96■□□□□ 0.15
MBD1-217ENST00000588937 PPP1R13LQ8WUF5 828 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 P3H4Q92791 437 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 CHMP6Q96FZ7 201 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 PWWP2AQ96N64 755 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 PEBP4Q96S96 227 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 CCDC134Q9H6E4 229 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 KLK14Q9P0G3 267 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 FARP1Q9Y4F1 1045 aaPredicted RBP15.96■□□□□ 0.15
MBD1-217ENST00000588937 IPPQ9Y573 584 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 ACTL7BQ9Y614 415 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 FAM169AQ9Y6X4 670 aa15.96■□□□□ 0.15
MBD1-217ENST00000588937 C5orf60A6NFR6 353 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 ZNF487B1APH4 448 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 MYO1CO00159 1063 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 ALOX15BO15296 676 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 HUS1O60921 280 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 GRAP2O75791 330 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 KIAA0754O94854 1291 aa15.95■□□□□ 0.14
MBD1-217ENST00000588937 RBP3P10745 1247 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms