RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 TTLL2Q9BWV7 592 aa20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 AVENQ9NQS1 362 aaPredicted RBP20.03■□□□□ 0.8
CLPTM1-209ENST00000588855 MMEP08473 750 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 GJA1P17302 382 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 FSHRP23945 695 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 GABRR2P28476 465 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 KRT9P35527 623 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 PLA2G4AP47712 749 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 RGS7P49802 495 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 ZBED6P86452 979 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 TRIM14Q14142 442 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 ASIC2Q16515 512 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 PUS10Q3MIT2 529 aaKnown RBP20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 SFMBT2Q5VUG0 894 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 GAREM2Q75VX8 874 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 GET4Q7L5D6 327 aaPredicted RBP20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 LEMD2Q8NC56 503 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 SLC35F5Q8WV83 523 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 UBXN6Q9BZV1 441 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 CYTH4Q9UIA0 394 aa20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 MRPS23Q9Y3D9 190 aaKnown RBP20.02■□□□□ 0.8
CLPTM1-209ENST00000588855 A0A1W2PRU2 124 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 MOSPD3O75425 235 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 TADA3O75528 432 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 RTN3O95197 1032 aaPredicted RBP20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 CEBPBP17676 345 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 MRPS5P82675 430 aaKnown RBP20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 PMF1Q6P1K2 205 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 IRF2BP2Q7Z5L9 587 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 TMEM150AQ86TG1 271 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 SHKBP1Q8TBC3 707 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 ATXN2LQ8WWM7 1075 aaKnown RBP20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 ING5Q8WYH8 240 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 IL37Q9NZH6 218 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 UXTQ9UBK9 157 aaPredicted RBP20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 FAM50BQ9Y247 325 aa20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 LUC7L2Q9Y383 392 aaKnown RBP20.02■□□□□ 0.79
CLPTM1-209ENST00000588855 TCF20Q9UGU0 1960 aaKnown RBP20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 F11P03951 625 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 CHRNB2P17787 502 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 YWHAQP27348 245 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 KIF11P52732 1056 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 FMO1Q01740 532 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 CDR2Q01850 454 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 RAB41Q5JT25 222 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 ZNF677Q86XU0 584 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 FMNL3Q8IVF7 1028 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 WDTC1Q8N5D0 677 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 C1orf131Q8NDD1 294 aaKnown RBP20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 ZNF397Q8NF99 534 aaPredicted RBP20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 PDCL3Q9H2J4 239 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 EHD2Q9NZN4 543 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 AIPL1Q9NZN9 384 aa20.01■□□□□ 0.79
CLPTM1-209ENST00000588855 ZNF197O14709 1029 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 CCDC172P0C7W6 258 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 SP100P23497 879 aaPredicted RBP20■□□□□ 0.79
CLPTM1-209ENST00000588855 CYP4F8P98187 520 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 GOLGA8FQ08AF8 430 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 GOLGA8DPQ0D2H9 430 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 ADIGQ0VDE8 80 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 TAF10Q12962 218 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 TBX2Q13207 712 aaPredicted RBP20■□□□□ 0.79
CLPTM1-209ENST00000588855 KCTD13Q8WZ19 329 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 FBXO32Q969P5 355 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 ASB2Q96Q27 587 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 NUCKS1Q9H1E3 243 aaKnown RBP20■□□□□ 0.79
CLPTM1-209ENST00000588855 LHX5Q9H2C1 402 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 ATXN3LQ9H3M9 355 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 COMMD8Q9NX08 183 aa20■□□□□ 0.79
CLPTM1-209ENST00000588855 FAM170AA1A519 330 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 FAM92AA1XBS5 289 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 PIK3R2O00459 728 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 GABBR2O75899 941 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 FGF19O95750 216 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 CDC25CP30307 473 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 TKTL1P51854 596 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 PDCLQ13371 301 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 TEAD2Q15562 447 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 STXBP5Q5T5C0 1151 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 POTEHQ6S545 545 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 SLITRK1Q96PX8 696 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 GCNAQ96QF7 691 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 MYADMQ96S97 322 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 PHF7Q9BWX1 381 aaPredicted RBP19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 FBXO44Q9H4M3 255 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 LRRC4Q9HBW1 653 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 CEP83Q9Y592 693 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 USP3Q9Y6I4 520 aa19.99■□□□□ 0.79
CLPTM1-209ENST00000588855 MFAP3LO75121 409 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 ADCY5O95622 1261 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 TPM1P09493 284 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 SKILP12757 684 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 LCP1P13796 627 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 PRKCIP41743 596 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 NPAS3Q8IXF0 933 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 OLIG1Q8TAK6 271 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 SYN2Q92777 582 aaPredicted RBP19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 FGF13Q92913 245 aa19.98■□□□□ 0.79
CLPTM1-209ENST00000588855 HSFY1Q96LI6 401 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms