RNA–Protein interactions for RNA: ENST00000588712.5

NEDD4L-224, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4L, Length 2,066 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-224ENST00000588712 FAM183BPQ6ZVS7 135 aa11.11□□□□□ -0.63
NEDD4L-224ENST00000588712 TMCO2Q7Z6W1 182 aaPredicted RBP11.11□□□□□ -0.63
NEDD4L-224ENST00000588712 MNS1Q8NEH6 495 aa11.11□□□□□ -0.63
NEDD4L-224ENST00000588712 FBXO22Q8NEZ5 403 aa11.11□□□□□ -0.63
NEDD4L-224ENST00000588712 RIN2Q8WYP3 895 aaPredicted RBP11.11□□□□□ -0.63
NEDD4L-224ENST00000588712 RPGRIP1Q96KN7 1286 aa11.11□□□□□ -0.63
NEDD4L-224ENST00000588712 SMOQ99835 787 aa11.11□□□□□ -0.63
NEDD4L-224ENST00000588712 HCSTQ9UBK5 93 aa11.11□□□□□ -0.63
NEDD4L-224ENST00000588712 PAPSS1O43252 624 aaPredicted RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 LCP1P13796 627 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 RFC1P35251 1148 aaPredicted RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 PAFAH1B1P43034 410 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 ZNF143P52747 638 aaPredicted RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 AMPD2Q01433 879 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 LRRC38Q5VT99 294 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 TMEM173Q86WV6 379 aaPredicted RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 RHOT1Q8IXI2 618 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 CEP112Q8N8E3 955 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 BCL7CQ8WUZ0 217 aaPredicted RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 SAMD11Q96NU1 681 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 OSBPL9Q96SU4 736 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 CNPY3Q9BT09 278 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 FBXO44Q9H4M3 255 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 METTL5Q9NRN9 209 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 TMLHEQ9NVH6 421 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 ABI2Q9NYB9 513 aaPredicted RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 RRN3Q9NYV6 651 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 FNIP2Q9P278 1114 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 TMEM59LQ9UK28 342 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 MRFAP1Q9Y605 127 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 BEST1O76090 585 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 FGF18O76093 207 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 ZBED1O96006 694 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 RB1P06400 928 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 PDGFRAP16234 1089 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 GPD1P21695 349 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 PSMA2P25787 234 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 CTNNA2P26232 953 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 SDC4P31431 198 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 CTNNA1P35221 906 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 BMPR1AP36894 532 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 CETN2P41208 172 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 RPL7AP62424 266 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 YWHAZP63104 245 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 UBE3AQ05086 875 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 ADIGQ0VDE8 80 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 HADHQ16836 314 aaKnown RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 BEND5Q7L4P6 421 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 TAS1R1Q7RTX1 841 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 PHLDB2Q86SQ0 1253 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 VPS52Q8N1B4 723 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 ZNF461Q8TAF7 563 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 TMEM209Q96SK2 561 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 KCNK16Q96T55 309 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 NAP1L3Q99457 506 aaPredicted RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 CARD9Q9H257 536 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 CHORDC1Q9UHD1 332 aaPredicted RBP11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 PCDHA3Q9Y5H8 950 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 CDY1Q9Y6F8 540 aa11.1□□□□□ -0.63
NEDD4L-224ENST00000588712 FAM170AA1A519 330 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 TMEM110-MUSTN1A8MSY1 372 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 TULP2O00295 520 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 DPYSL4O14531 572 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 PSTPIP1O43586 416 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 RTN3O95197 1032 aaPredicted RBP11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 CYP2F1P24903 491 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 RWDD2BP57060 319 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 CCDC181Q5TID7 509 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 PM20D1Q6GTS8 502 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 ARHGAP18Q8N392 663 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 ZMIZ2Q8NF64 920 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 SPATA17Q96L03 361 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 RNPC3Q96LT9 517 aaKnown RBP11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 POPDC2Q9HBU9 364 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 AFF4Q9UHB7 1163 aaKnown RBP11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 STAP1Q9ULZ2 295 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 VWA8A3KMH1 1905 aa11.09□□□□□ -0.63
NEDD4L-224ENST00000588712 C2CD4BA6NLJ0 364 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 HHLA1C9JL84 531 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 F8VP50 259 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 KCNK3O14649 394 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 FANCGO15287 622 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 KRT7P08729 469 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 OR4Q2P0C623 313 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 CTSAP10619 480 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 OR1D2P34982 312 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 PCK1P35558 622 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 MATKP42679 507 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 PTPN9P43378 593 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 ARPP19P56211 112 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 RNASE9P60153 205 aaKnown RBP11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 RAB33AQ14088 237 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 ODF2Q5BJF6 829 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 POLNQ7Z5Q5 900 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 NUP93Q8N1F7 819 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 DDX56Q9NY93 547 aaKnown RBP11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 TJP2Q9UDY2 1190 aa11.08□□□□□ -0.63
NEDD4L-224ENST00000588712 USP3Q9Y6I4 520 aa11.08□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms