RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 FILIP1Q7Z7B0 1213 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 PROSER1Q86XN7 944 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 SFTPA1Q8IWL2 248 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 HSCBQ8IWL3 235 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 HDDC3Q8N4P3 179 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 CHCHD4Q8N4Q1 142 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 TOP6BLQ8N6T0 577 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 LRRC52Q8N7C0 313 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 CACTINQ8WUQ7 758 aaKnown RBP11.86□□□□□ -0.51
CALR-206ENST00000588454 POMGNT1Q8WZA1 660 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 RAD54LQ92698 747 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 IKZF4Q9H2S9 585 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 ZHX3Q9H4I2 956 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 CAPN10Q9HC96 672 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 TRPM5Q9NZQ8 1165 aa11.86□□□□□ -0.51
CALR-206ENST00000588454 ASH1LQ9NR48 2969 aaKnown RBP11.86□□□□□ -0.51
CALR-206ENST00000588454 KNL1Q8NG31 2342 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 SLC9A3R1O14745 358 aaPredicted RBP11.85□□□□□ -0.51
CALR-206ENST00000588454 HCRTO43612 131 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 TBCAO75347 108 aaKnown RBP11.85□□□□□ -0.51
CALR-206ENST00000588454 APODP05090 189 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 SERPINF2P08697 491 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 GRIA2P42262 883 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 ATXN3P54252 364 aaPredicted RBP11.85□□□□□ -0.51
CALR-206ENST00000588454 GFPT1Q06210 699 aaPredicted RBP11.85□□□□□ -0.51
CALR-206ENST00000588454 HNRNPDQ14103 355 aaKnown RBP11.85□□□□□ -0.51
CALR-206ENST00000588454 ZNF423Q2M1K9 1284 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 FAM173BQ6P4H8 233 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 VSTM1Q6UX27 236 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 C4orf50Q6ZRC1 276 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 DENND5BQ6ZUT9 1274 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 LIMS2Q7Z4I7 341 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 CSGALNACT2Q8N6G5 542 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 ZSWIM2Q8NEG5 633 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 HMGB4Q8WW32 186 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 HVCN1Q96D96 273 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 TTLL2Q9BWV7 592 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 STRA6Q9BX79 667 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 RNF38Q9H0F5 515 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 BCCIPQ9P287 314 aaKnown RBP eCLIP11.85□□□□□ -0.51
CALR-206ENST00000588454 MAGEC2Q9UBF1 373 aaPredicted RBP11.85□□□□□ -0.51
CALR-206ENST00000588454 CIZ1Q9ULV3 898 aaPredicted RBP11.85□□□□□ -0.51
CALR-206ENST00000588454 GPSM3Q9Y4H4 160 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 SNX9Q9Y5X1 595 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 URB1O60287 2271 aaKnown RBP11.85□□□□□ -0.51
CALR-206ENST00000588454 PCDH15Q96QU1 1955 aa11.85□□□□□ -0.51
CALR-206ENST00000588454 ZNF840PA6NDX5 716 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 AP5Z1O43299 807 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 OPHN1O60890 802 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 ATP2C2O75185 946 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 PPP1R37O75864 691 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 OLFM2O95897 454 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 CFIP05156 583 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 CD59P13987 128 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 PLCG1P19174 1290 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 SYT1P21579 422 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 PPP3CCP48454 512 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 USP46P62068 366 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 RBP5P82980 135 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 SOWAHAQ2M3V2 549 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 SOWAHCQ53LP3 525 aaPredicted RBP11.84□□□□□ -0.51
CALR-206ENST00000588454 MCTP1Q6DN14 999 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 DPH6Q7L8W6 267 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 RABEPKQ7Z6M1 372 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 C12orf40Q86WS4 652 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 BRSK2Q8IWQ3 736 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 ADGRF2Q8IZF7 708 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 KCNV2Q8TDN2 545 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 INTS4Q96HW7 963 aaKnown RBP11.84□□□□□ -0.51
CALR-206ENST00000588454 FAM213AQ9BRX8 229 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 GTPBP2Q9BX10 602 aaKnown RBP11.84□□□□□ -0.51
CALR-206ENST00000588454 FSCN3Q9NQT6 498 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 ARHGEF4Q9NR80 690 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 EHD2Q9NZN4 543 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 SIX4Q9UIU6 781 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 ITGA11Q9UKX5 1188 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 SMC3Q9UQE7 1217 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 MTMR6Q9Y217 621 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 PLXNB3Q9ULL4 1909 aa11.84□□□□□ -0.51
CALR-206ENST00000588454 ATXN2Q99700 1313 aaKnown RBP11.84□□□□□ -0.51
CALR-206ENST00000588454 TCRBV21S2A2A0A5A6 115 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 ARHGAP33O14559 1287 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 ADH1CP00326 375 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 LDHAP00338 332 aaKnown RBP11.83□□□□□ -0.52
CALR-206ENST00000588454 BDNFP23560 247 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 LMO2P25791 158 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 GRIK1P39086 918 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 RPL6Q02878 288 aaKnown RBP11.83□□□□□ -0.52
CALR-206ENST00000588454 KCNA1Q09470 495 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 SCAPQ12770 1279 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 RESTQ13127 1097 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 SLC14A1Q13336 389 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 SLC36A4Q6YBV0 504 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 PGBD3Q8N328 593 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 PHTF2Q8N3S3 785 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 MINDY1Q8N5J2 469 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 KRI1Q8N9T8 703 aaKnown RBP11.83□□□□□ -0.52
CALR-206ENST00000588454 KBTBD7Q8WVZ9 684 aa11.83□□□□□ -0.52
CALR-206ENST00000588454 LARP4BQ92615 738 aaKnown RBP11.83□□□□□ -0.52
CALR-206ENST00000588454 MYLPFQ96A32 169 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms