RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 RBM12Q9NTZ6 932 aaKnown RBP23.15■■□□□ 1.3
CIRBP-219ENST00000588411 OBSL1O75147 1896 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 PPP3CAQ08209 521 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 CCINQ13939 588 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 COBLL1Q53SF7 1204 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 KRT39Q6A163 491 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 CRYBG2Q8N1P7 616 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 KIAA1958Q8N8K9 716 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 ENGASEQ8NFI3 743 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 TAS1R2Q8TE23 839 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 FBXO32Q969P5 355 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 NIF3L1Q9GZT8 377 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 COMMD8Q9NX08 183 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 ZNF638Q14966 1978 aaKnown RBP23.14■■□□□ 1.29
CIRBP-219ENST00000588411 PTPRDP23468 1912 aa23.14■■□□□ 1.29
CIRBP-219ENST00000588411 AP1G2O75843 785 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 PRCPP42785 496 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 SLC7A9P82251 487 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 STIM1Q13586 685 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 DDX42Q86XP3 938 aaKnown RBP eCLIP23.13■■□□□ 1.292e-6■■■□□ 17.9
CIRBP-219ENST00000588411 FUKQ8N0W3 1084 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 RIN3Q8TB24 985 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 ECT2Q9H8V3 914 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 TMEM30AQ9NV96 361 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 WNT6Q9Y6F9 365 aa23.13■■□□□ 1.29
CIRBP-219ENST00000588411 TRDMT1O14717 391 aaKnown RBP23.12■■□□□ 1.29
CIRBP-219ENST00000588411 NFATC1O95644 943 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 CCDC130P13994 396 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 MXI1P50539 228 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 SATB1Q01826 763 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 INCA1Q0VD86 236 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 TMEM196Q5HYL7 178 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 Q6ZS52 159 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 TTC39CQ8N584 583 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 SLC2A14Q8TDB8 520 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 RUBCNQ92622 972 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 SECISBP2LQ93073 1101 aaKnown RBP23.12■■□□□ 1.29
CIRBP-219ENST00000588411 KCNK16Q96T55 309 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 NT5C1AQ9BXI3 368 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.12■■□□□ 1.297e-8■■■■■ 79.6
CIRBP-219ENST00000588411 PCDHA5Q9Y5H7 936 aa23.12■■□□□ 1.29
CIRBP-219ENST00000588411 KIF26AQ9ULI4 1882 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-219ENST00000588411 OTOL1A6NHN0 477 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-219ENST00000588411 LEFTY2O00292 366 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 SLC9A3R1O14745 358 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-219ENST00000588411 SLC16A3O15427 465 aaKnown RBP23.11■■□□□ 1.29
CIRBP-219ENST00000588411 LILRB5O75023 590 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 ATG13O75143 517 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 PAPSS2O95340 614 aaPredicted RBP23.11■■□□□ 1.29
CIRBP-219ENST00000588411 OAS1P00973 400 aaKnown RBP23.11■■□□□ 1.29
CIRBP-219ENST00000588411 FAM200BP0CF97 657 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 DRD1P21728 446 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 SLC5A3P53794 718 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 FKBP3Q00688 224 aaKnown RBP23.11■■□□□ 1.29
CIRBP-219ENST00000588411 LRRC63Q05C16 580 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 ORC1Q13415 861 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 GAS6Q14393 721 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 EML3Q32P44 896 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 PAQR9Q6ZVX9 377 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 SPATA20Q8TB22 786 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 FAXDC2Q96IV6 333 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 P2RY13Q9BPV8 354 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 FBXO44Q9H4M3 255 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 FAM49BQ9NUQ9 324 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 HMGXB4Q9UGU5 601 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 CPQQ9Y646 472 aa23.11■■□□□ 1.29
CIRBP-219ENST00000588411 GREB1Q4ZG55 1949 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 OLFM2O95897 454 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 MBL2P11226 248 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-219ENST00000588411 TDGF1P13385 188 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 GJA4P35212 333 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 PPP1R2P41236 205 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 MCCD1P59942 119 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-219ENST00000588411 WDR44Q5JSH3 913 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 HECTD3Q5T447 861 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 ELOA2Q8IYF1 753 aaPredicted RBP23.1■■□□□ 1.29
CIRBP-219ENST00000588411 SUMF1Q8NBK3 374 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 FBXL13Q8NEE6 735 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 EEF2KMTQ96G04 330 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 EPC1Q9H2F5 836 aa23.1■■□□□ 1.29
CIRBP-219ENST00000588411 APOBEC3GQ9HC16 384 aaKnown RBP23.1■■□□□ 1.29
CIRBP-219ENST00000588411 FANCMQ8IYD8 2048 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 PSMA7O14818 248 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 CD58P19256 250 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 TUBP50607 506 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 FBXO43Q4G163 708 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 DCAF17Q5H9S7 520 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-219ENST00000588411 TCERG1LQ5VWI1 586 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 FSTL4Q6MZW2 842 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 C12orf29Q8N999 325 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 CCDC26Q8TAB7 109 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 SCAMP5Q8TAC9 235 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 HNRNPABQ99729 332 aaKnown RBP23.09■■□□□ 1.29
CIRBP-219ENST00000588411 NACA2Q9H009 215 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 RNF38Q9H0F5 515 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 CSNK1G1Q9HCP0 422 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 SMPD4Q9NXE4 827 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 IL37Q9NZH6 218 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 NCDNQ9UBB6 729 aa23.09■■□□□ 1.29
CIRBP-219ENST00000588411 RAB23Q9ULC3 237 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms