RNA–Protein interactions for RNA: ENST00000587987.5

U2AF1L4-208, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 1 (best)

Gene U2AF1L4, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-208	ENST00000587987	TC2N	Q8N9U0	490 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	SPC24	Q8NBT2	197 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	SMARCD1	Q96GM5	515 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PDLIM2	Q96JY6	352 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	NOX5	Q96PH1	765 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TWNK	Q96RR1	684 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PKMYT1	Q99640	499 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	AGPAT1	Q99943	283 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	MED10	Q9BTT4	135 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	DUSP16	Q9BY84	665 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	MIS12	Q9H081	205 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	LHX5	Q9H2C1	402 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	SEMA4A	Q9H3S1	761 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	DPEP3	Q9H4B8	488 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	KCNK12	Q9HB15	430 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CRTAC1	Q9NQ79	661 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	EHD2	Q9NZN4	543 aa		10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TPR	P12270	2363 aa	Known RBP	10.02	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	OTOGL	Q3ZCN5	2332 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	SSU72P8	A0A1W2PR75	194 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	WDR27	A2RRH5	827 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TRIM66	O15016	1216 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	ATP2C2	O75185	946 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	KRT37	O76014	449 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	FAM200B	P0CF97	657 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	SETSIP	P0DME0	302 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CLCN4	P51793	760 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	BCAT1	P54687	386 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PSMC1	P62191	440 aa	Known RBP	10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	ARID5A	Q03989	594 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	ADCY1	Q08828	1119 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	BST2	Q10589	180 aa	Known RBP	10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	MAPK8IP2	Q13387	824 aa	Predicted RBP	10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	LILRA6	Q6PI73	481 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	RSPO2	Q6UXX9	243 aa	Predicted RBP	10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CYP26C1	Q6V0L0	522 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CCDC170	Q8IYT3	715 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	C12orf29	Q8N999	325 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TMEM35B	Q8NCS4	154 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	MSANTD4	Q8NCY6	345 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CCDC112	Q8NEF3	446 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	SLC2A14	Q8TDB8	520 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	EPS8L1	Q8TE68	723 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	STK32A	Q8WU08	396 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	MYLPF	Q96A32	169 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PCED1B	Q96HM7	432 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	C8orf48	Q96LL4	319 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	B3GNT5	Q9BYG0	378 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	HAUS4	Q9H6D7	363 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TBC1D17	Q9HA65	648 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CSNK1G1	Q9HCP0	422 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PNPLA8	Q9NP80	782 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CYLD	Q9NQC7	956 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	COMMD8	Q9NX08	183 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	HMGXB4	Q9UGU5	601 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CA14	Q9ULX7	337 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	NME7	Q9Y5B8	376 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	C2orf16	Q68DN1	1984 aa		10.01	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TSC2	P49815	1807 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	MTMR11	A4FU01	709 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	KRBA1	A5PL33	1030 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987		O00370	1275 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PRRG1	O14668	218 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TGM5	O43548	720 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	HAPLN1	P10915	354 aa	Predicted RBP	10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	GZMA	P12544	262 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	RPL17	P18621	184 aa	Known RBP	10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	BRD2	P25440	801 aa	Known RBP	10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	GBP2	P32456	591 aa	Predicted RBP	10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	GRIK1	P39086	918 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	ALDH1A3	P47895	512 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	ORC1	Q13415	861 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TDRD12	Q587J7	1177 aa	Known RBP	10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	C10orf76	Q5T2E6	689 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	LIN9	Q5TKA1	542 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	HGSNAT	Q68CP4	663 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	ZC3H14	Q6PJT7	736 aa	Known RBP	10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	RNF19B	Q6ZMZ0	732 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CCDC186	Q7Z3E2	898 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PALB2	Q86YC2	1186 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	FUK	Q8N0W3	1084 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	ELMOD1	Q8N336	334 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	RSAD2	Q8WXG1	361 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TFAP2B	Q92481	460 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	DDX1	Q92499	740 aa	Known RBP	10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	SPATA17	Q96L03	361 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	HSFY1	Q96LI6	401 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CCDC42	Q96M95	316 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CNTNAP3B	Q96NU0	1288 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	PPP1R9B	Q96SB3	815 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	TMEM209	Q96SK2	561 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	BAG1	Q99933	345 aa	Predicted RBP	10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CNTNAP3	Q9BZ76	1288 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	DEF6	Q9H4E7	631 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	CYP4F11	Q9HBI6	524 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	IGSF9	Q9P2J2	1179 aa		10	□□□□□ -0.81
U2AF1L4-208	ENST00000587987	NOCT	Q9UK39	431 aa	Known RBP	10	□□□□□ -0.81

Retrieved 100 of 20,778 RNA–protein pairs in 28 ms