RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 NCALDP61601 193 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 PPP2R2AP63151 447 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 FSCN1Q16658 493 aaKnown RBP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 KIZQ2M2Z5 673 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 CFAP157Q5JU67 520 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 SEL1L2Q5TEA6 688 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 DCAF12L1Q5VU92 463 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 CATSPER4Q7RTX7 472 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 TRPM8Q7Z2W7 1104 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 PIGWQ7Z7B1 504 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 TMEM192Q8IY95 271 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 TMEM35BQ8NCS4 154 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 ABHD8Q96I13 439 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 HIC2Q96JB3 615 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 NR1H4Q96RI1 486 aaPredicted RBP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 PPP1R16BQ96T49 567 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 FAM49AQ9H0Q0 323 aaPredicted RBP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 GDF3Q9NR23 364 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 DMGDHQ9UI17 866 aaKnown RBP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 ANAPC7Q9UJX3 599 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 R3HDM2Q9Y2K5 976 aaKnown RBP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 PCDHA3Q9Y5H8 950 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 DOCK3Q8IZD9 2030 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 CCDC162PA2VCL2 907 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 MAGEA13PA6NCF6 341 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 EIF3FO00303 357 aaPredicted RBP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 TIMM44O43615 452 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 TOMM70O94826 608 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 ITGB3P05106 788 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 RPLP2P05387 115 aaKnown RBP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 HNRNPCP07910 306 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 KRT19P08727 400 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 CD58P19256 250 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 CALB2P22676 271 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 RRM1P23921 792 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 MAN1A1P33908 653 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 RBP5P82980 135 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 TAP1Q03518 808 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 INAQ16352 499 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 PTPROQ16827 1216 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 PLEKHA7Q6IQ23 1121 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 KLC3Q6P597 504 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 NANOGNBQ7Z5D8 188 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 PEX5LQ8IYB4 626 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 CPA5Q8WXQ8 436 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 ALG3Q92685 438 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 SNX27Q96L92 541 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 EIF2AQ9BY44 585 aaKnown RBP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 RETREG1Q9H6L5 497 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 RNPEPL1Q9HAU8 725 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 PARVAQ9NVD7 372 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 LRCH1Q9Y2L9 728 aa10.1□□□□□ -0.79
LINC01539-201ENST00000587904 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.1□□□□□ -0.79
LINC01539-201ENST00000587904 CITO14578 2027 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 C17orf102A2RUQ5 167 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 HTR3EA5X5Y0 456 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 TRIM43BA6NCK2 446 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 CSDE1O75534 798 aaKnown RBP10.09□□□□□ -0.79
LINC01539-201ENST00000587904 PDHA1P08559 390 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 MYL3P08590 195 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 MMP8P22894 467 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 YARSP54577 528 aaKnown RBP10.09□□□□□ -0.79
LINC01539-201ENST00000587904 PTP4A2Q12974 167 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 CUL1Q13616 776 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 MAP7Q14244 749 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 CNPY1Q3B7I2 92 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 ZNF394Q53GI3 561 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 MFSD14CQ5VZR4 134 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 TAF2Q6P1X5 1199 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 TMEM53Q6P2H8 277 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 SCARA5Q6ZMJ2 495 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 ENDOVQ8N8Q3 282 aaKnown RBP10.09□□□□□ -0.79
LINC01539-201ENST00000587904 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.09□□□□□ -0.79
LINC01539-201ENST00000587904 DNAJC9Q8WXX5 260 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 LENG1Q96BZ8 264 aaPredicted RBP10.09□□□□□ -0.79
LINC01539-201ENST00000587904 RUNDC3BQ96NL0 473 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 RAB3IPQ96QF0 476 aaPredicted RBP10.09□□□□□ -0.79
LINC01539-201ENST00000587904 C11orf70Q9BRQ4 267 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 LHX5Q9H2C1 402 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 STRIP2Q9ULQ0 834 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 EFR3BQ9Y2G0 817 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 CASP8AP2Q9UKL3 1982 aa10.09□□□□□ -0.79
LINC01539-201ENST00000587904 SART1O43290 800 aaKnown RBP10.08□□□□□ -0.8
LINC01539-201ENST00000587904 RAD51CO43502 376 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 SUPT3HO75486 399 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 PROSCO94903 275 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 ASLP04424 464 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 MYZAPP0CAP1 466 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 RARAP10276 462 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 CYBAP13498 195 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 HOXA11P31270 313 aaPredicted RBP10.08□□□□□ -0.8
LINC01539-201ENST00000587904 HSPA9P38646 679 aaKnown RBP10.08□□□□□ -0.8
LINC01539-201ENST00000587904 SERPINB8P50452 374 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 GJA9P57773 515 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 ARPC4P59998 168 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 RNASE9P60153 205 aaKnown RBP10.08□□□□□ -0.8
LINC01539-201ENST00000587904 KCNJ2P63252 427 aa10.08□□□□□ -0.8
LINC01539-201ENST00000587904 NKX3-2P78367 333 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms