RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 NOMO1Q15155 1222 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 DBN1Q16643 649 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 DALRD3Q5D0E6 543 aaKnown RBP19.39■□□□□ 0.7
DDX39A-206ENST00000587730 ZNF667Q5HYK9 610 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 ATG16L1Q676U5 607 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 MPZL3Q6UWV2 235 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 CATSPERGQ6ZRH7 1159 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 TSHZ1Q6ZSZ6 1077 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 XYLT1Q86Y38 959 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 FAM71DQ8N9W8 422 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 SPATA18Q8TC71 538 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 PRPF31Q8WWY3 499 aaKnown RBP19.39■□□□□ 0.7
DDX39A-206ENST00000587730 DNAJC9Q8WXX5 260 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 ACSF2Q96CM8 615 aaPredicted RBP19.39■□□□□ 0.7
DDX39A-206ENST00000587730 SPDL1Q96EA4 605 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 MCRS1Q96EZ8 462 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 KCNK4Q9NYG8 393 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 TEX264Q9Y6I9 313 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 KIAA1217Q5T5P2 1943 aa19.39■□□□□ 0.7
DDX39A-206ENST00000587730 A0A0G2JND7 137 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 TCRBV9S1A1TA0A576 114 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 A6NHS1 94 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 NEBLO76041 1014 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 TRUB2O95900 331 aaKnown RBP19.39■□□□□ 0.69
DDX39A-206ENST00000587730 HOXC6P09630 235 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 FGFR1P11362 822 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 DESP17661 470 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 IL1R2P27930 398 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 SP2Q02086 613 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 KCNJ11Q14654 390 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 LBRQ14739 615 aaKnown RBP19.39■□□□□ 0.69
DDX39A-206ENST00000587730 EFTUD2Q15029 972 aaKnown RBP eCLIP19.39■□□□□ 0.699e-7■■■■■ 30.3
DDX39A-206ENST00000587730 ZNF394Q53GI3 561 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 UNC45BQ8IWX7 931 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 VPS52Q8N1B4 723 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 JDP2Q8WYK2 163 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 RTP4Q96DX8 246 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 C7orf26Q96N11 449 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 DCTN4Q9UJW0 460 aa19.39■□□□□ 0.69
DDX39A-206ENST00000587730 MYH9P35579 1960 aaKnown RBP19.38■□□□□ 0.69
DDX39A-206ENST00000587730 FER1L6Q2WGJ9 1857 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 ENDOD1O94919 500 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 HMGCRP04035 888 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 PAX7P23759 505 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 ATICP31939 592 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 TNFSF9P41273 254 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 ELK3P41970 407 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 OCRLQ01968 901 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 PDK2Q15119 407 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 CCDC6Q16204 474 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 MUM1Q2TAK8 710 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 SMTNL2Q2TAL5 461 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 PLEKHG4Q58EX7 1191 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 DARS2Q6PI48 645 aaKnown RBP19.38■□□□□ 0.69
DDX39A-206ENST00000587730 ZBTB33Q86T24 672 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 ARFGAP1Q8N6T3 406 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 RFWD2Q8NHY2 731 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 JOSD2Q8TAC2 188 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 SEPT1Q8WYJ6 367 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 WDR83Q9BRX9 315 aaKnown RBP19.38■□□□□ 0.69
DDX39A-206ENST00000587730 CNPY3Q9BT09 278 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 OSBPL1AQ9BXW6 950 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 KANSL3Q9P2N6 904 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 SLC17A7Q9P2U7 560 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 USP18Q9UMW8 372 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 TELO2Q9Y4R8 837 aa19.38■□□□□ 0.69
DDX39A-206ENST00000587730 COPEO14579 308 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 GSC2O15499 205 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 BANF1O75531 89 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 EDN1P05305 212 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 SNRPAP09012 282 aaKnown RBP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 DLDP09622 509 aaKnown RBP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 ESRRAP11474 423 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 SKIP12755 728 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 GM2AP17900 193 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 PROZP22891 400 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 MIPP30301 263 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 MAGEA6P43360 314 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 SERPINB4P48594 390 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 ZNF143P52747 638 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 SH2D5Q6ZV89 423 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 ARMC2Q8NEN0 867 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 KCNV2Q8TDN2 545 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 USP6NLQ92738 828 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 STMN2Q93045 179 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 SIKE1Q9BRV8 207 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 TMEM120AQ9BXJ8 343 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 CADM1Q9BY67 442 aaKnown RBP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 METTL5Q9NRN9 209 aaKnown RBP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 CNTN3Q9P232 1028 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 KIAA1257Q9ULG3 409 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 CHMP2BQ9UQN3 213 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 WDR91A4D1P6 747 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 ZNF487B1APH4 448 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 NVLO15381 856 aaKnown RBP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 FARP2O94887 1054 aaPredicted RBP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 TGM2P21980 687 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 YWHAGP61981 247 aaKnown RBP eCLIP19.37■□□□□ 0.69
DDX39A-206ENST00000587730 KLC1Q07866 573 aa19.37■□□□□ 0.69
DDX39A-206ENST00000587730 NBPF20Q3BBV1 942 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms