RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 HDCP19113 662 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 ERCC5P28715 1186 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-207ENST00000587256 MTIF2P46199 727 aaKnown RBP15.68■□□□□ 0.1
ATG4D-207ENST00000587256 RAD23BP54727 409 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 ZNF268Q14587 947 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-207ENST00000587256 PPP1R26Q5T8A7 1209 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-207ENST00000587256 ZNF852Q6ZMS4 543 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 FAM114A1Q8IWE2 563 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 PRSS33Q8NF86 280 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 PJA1Q8NG27 643 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 SCAMP5Q8TAC9 235 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 OVCA2Q8WZ82 227 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 MED15Q96RN5 788 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 CYP2S1Q96SQ9 504 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 INTS2Q9H0H0 1204 aaKnown RBP15.68■□□□□ 0.1
ATG4D-207ENST00000587256 CSNK1G1Q9HCP0 422 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 TRPV5Q9NQA5 729 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 GCNT4Q9P109 453 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 MRPS17Q9Y2R5 130 aaKnown RBP15.68■□□□□ 0.1
ATG4D-207ENST00000587256 SIT1Q9Y3P8 196 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 PATJQ8NI35 1801 aa15.68■□□□□ 0.1
ATG4D-207ENST00000587256 ARNTLO00327 626 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 TNFRSF10BO14763 440 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 PFKLP17858 780 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 CD72P21854 359 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 KPNA1P52294 538 aaPredicted RBP15.67■□□□□ 0.1
ATG4D-207ENST00000587256 NUBP1P53384 320 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 USP4Q13107 963 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 MTF1Q14872 753 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 TTC8Q8TAM2 541 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 DDX23Q9BUQ8 820 aaKnown RBP15.67■□□□□ 0.1
ATG4D-207ENST00000587256 FBXO44Q9H4M3 255 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 THAP9Q9H5L6 903 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 LTB4R2Q9NPC1 389 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 COMMD8Q9NX08 183 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 GMIPQ9P107 970 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 ARHGAP26Q9UNA1 814 aa15.67■□□□□ 0.1
ATG4D-207ENST00000587256 ARIH1Q9Y4X5 557 aaPredicted RBP15.67■□□□□ 0.1
ATG4D-207ENST00000587256 ZNF638Q14966 1978 aaKnown RBP15.67■□□□□ 0.1
ATG4D-207ENST00000587256 MYH10P35580 1976 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 KIF26AQ9ULI4 1882 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-207ENST00000587256 MYO16Q9Y6X6 1858 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 MAN2B1O00754 1011 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 GALR2O43603 387 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-207ENST00000587256 DCNP07585 359 aaKnown RBP15.66■□□□□ 0.1
ATG4D-207ENST00000587256 ACO1P21399 889 aaKnown RBP15.66■□□□□ 0.1
ATG4D-207ENST00000587256 PTPN5P54829 565 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 SLC8A3P57103 927 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 TNK2Q07912 1038 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 ZNF77Q15935 545 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 GOLGA7BQ2TAP0 167 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 SGO2Q562F6 1265 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 HSP90AA4PQ58FG1 418 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 ARHGAP17Q68EM7 881 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 TMEM270Q6UE05 265 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 RRAGAQ7L523 313 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 GPRIN1Q7Z2K8 1008 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 ARHGEF19Q8IW93 802 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 CCDC105Q8IYK2 499 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 UBR7Q8N806 425 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 EHBP1Q8NDI1 1231 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 LMO3Q8TAP4 145 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 SH3RF2Q8TEC5 729 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 MSANTD3Q96H12 275 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 DUSP16Q9BY84 665 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 NACA2Q9H009 215 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 PNPLA8Q9NP80 782 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 SMPD4Q9NXE4 827 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 GTSE1Q9NYZ3 720 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 HESX1Q9UBX0 185 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 NDRG2Q9UN36 371 aaKnown RBP15.66■□□□□ 0.1
ATG4D-207ENST00000587256 PCDHB4Q9Y5E5 795 aa15.66■□□□□ 0.1
ATG4D-207ENST00000587256 HELZP42694 1942 aaKnown RBP15.65■□□□□ 0.1
ATG4D-207ENST00000587256 ANAPC1Q9H1A4 1944 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 FAM170BA6NMN3 283 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 CYP26A1O43174 497 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 OAS1P00973 400 aaKnown RBP15.65■□□□□ 0.1
ATG4D-207ENST00000587256 MBL2P11226 248 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-207ENST00000587256 TARSP26639 723 aaKnown RBP15.65■□□□□ 0.1
ATG4D-207ENST00000587256 SOX9P48436 509 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 IFNAR2P48551 515 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 GCNT1Q02742 428 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 ITPRIPL2Q3MIP1 535 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 HECTD3Q5T447 861 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 CCDC183Q5T5S1 534 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 SASS6Q6UVJ0 657 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 RBM43Q6ZSC3 357 aaKnown RBP15.65■□□□□ 0.1
ATG4D-207ENST00000587256 IRF2BP1Q8IU81 584 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 DTWD2Q8NBA8 298 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 RIN3Q8TB24 985 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 FAM3CQ92520 227 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 KAT5Q92993 513 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 C8orf33Q9H7E9 229 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-207ENST00000587256 GKN1Q9NS71 199 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 IL37Q9NZH6 218 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 CHORDC1Q9UHD1 332 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-207ENST00000587256 TSPAN16Q9UKR8 245 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 CPQQ9Y646 472 aa15.65■□□□□ 0.1
ATG4D-207ENST00000587256 MIA3Q5JRA6 1907 aa15.64■□□□□ 0.09
ATG4D-207ENST00000587256 FAM92AA1XBS5 289 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms