RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 KRT82Q9NSB4 513 aa18.78■□□□□ 0.6
TPM4-206ENST00000587201 RBM12Q9NTZ6 932 aaKnown RBP18.78■□□□□ 0.6
TPM4-206ENST00000587201 FAM49BQ9NUQ9 324 aa18.78■□□□□ 0.6
TPM4-206ENST00000587201 DUS2Q9NX74 493 aaKnown RBP18.78■□□□□ 0.6
TPM4-206ENST00000587201 MAN1B1Q9UKM7 699 aa18.78■□□□□ 0.6
TPM4-206ENST00000587201 CACNA1IQ9P0X4 2223 aa18.78■□□□□ 0.6
TPM4-206ENST00000587201 PATJQ8NI35 1801 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 PSMA7O14818 248 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 SLC16A3O15427 465 aaKnown RBP18.77■□□□□ 0.6
TPM4-206ENST00000587201 ARSAP15289 507 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 CD58P19256 250 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 IFNAR2P48551 515 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 SLC5A3P53794 718 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 INCA1Q0VD86 236 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 DCAF17Q5H9S7 520 aaPredicted RBP18.77■□□□□ 0.6
TPM4-206ENST00000587201 DGKKQ5KSL6 1271 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 C12orf29Q8N999 325 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 FBXL13Q8NEE6 735 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 OSCP1Q8WVF1 389 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 TWNKQ96RR1 684 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 NT5C1AQ9BXI3 368 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 SEMA4AQ9H3S1 761 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 RAB20Q9NX57 234 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 ARHGAP26Q9UNA1 814 aa18.77■□□□□ 0.6
TPM4-206ENST00000587201 USP34Q70CQ2 3546 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 OTOL1A6NHN0 477 aaPredicted RBP18.76■□□□□ 0.59
TPM4-206ENST00000587201 ADORA2BP29275 332 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 MAP3K7CLP57077 242 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 AMPD2Q01433 879 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 TSSK4Q6SA08 328 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 ZC3H3Q8IXZ2 948 aaKnown RBP18.76■□□□□ 0.59
TPM4-206ENST00000587201 PDZD8Q8NEN9 1154 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 SCAMP5Q8TAC9 235 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 SEMA4DQ92854 862 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 SMOQ99835 787 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 DNAI2Q9GZS0 605 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 PRMT8Q9NR22 394 aaPredicted RBP18.76■□□□□ 0.59
TPM4-206ENST00000587201 WNT6Q9Y6F9 365 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 ANAPC1Q9H1A4 1944 aa18.76■□□□□ 0.59
TPM4-206ENST00000587201 ZFHX2Q9C0A1 2572 aaPredicted RBP18.76■□□□□ 0.59
TPM4-206ENST00000587201 KIF26AQ9ULI4 1882 aaPredicted RBP18.75■□□□□ 0.59
TPM4-206ENST00000587201 LEFTY2O00292 366 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 TNFRSF10BO14763 440 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 CILPO75339 1184 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 LMNAP02545 664 aaKnown RBP18.75■□□□□ 0.59
TPM4-206ENST00000587201 FAM200BP0CF97 657 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 TCF3P15923 654 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 PPP1R2P41236 205 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 CCR3P51677 355 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 PPP2R5DQ14738 602 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 WDR44Q5JSH3 913 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 CPA6Q8N4T0 437 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 ZMIZ2Q8NF64 920 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 OVCA2Q8WZ82 227 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 ATP2A3Q93084 1043 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 DHTKD1Q96HY7 919 aaPredicted RBP18.75■□□□□ 0.59
TPM4-206ENST00000587201 RNF38Q9H0F5 515 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 ECT2Q9H8V3 914 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 COMMD8Q9NX08 183 aa18.75■□□□□ 0.59
TPM4-206ENST00000587201 ARMCX3Q9UH62 379 aaPredicted RBP18.75■□□□□ 0.59
TPM4-206ENST00000587201 CHORDC1Q9UHD1 332 aaPredicted RBP18.75■□□□□ 0.59
TPM4-206ENST00000587201 BEST1O76090 585 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 OAS1P00973 400 aaKnown RBP18.74■□□□□ 0.59
TPM4-206ENST00000587201 MBL2P11226 248 aaPredicted RBP18.74■□□□□ 0.59
TPM4-206ENST00000587201 CD44P16070 742 aaKnown RBP18.74■□□□□ 0.59
TPM4-206ENST00000587201 SLC7A9P82251 487 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 GRSF1Q12849 480 aaKnown RBP eCLIP18.74■□□□□ 0.59
TPM4-206ENST00000587201 GAS6Q14393 721 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 CBWD6Q4V339 395 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 ZNF394Q53GI3 561 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 CBWD3Q5JTY5 395 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 CBWD5Q5RIA9 395 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 KLHL10Q6JEL2 608 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 MAMSTRQ6ZN01 415 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 Q6ZS52 159 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 WHAMMQ8TF30 809 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 ATRIPQ8WXE1 791 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 CYFIP2Q96F07 1278 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 FAXDC2Q96IV6 333 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 HNRNPABQ99729 332 aaKnown RBP18.74■□□□□ 0.59
TPM4-206ENST00000587201 CSNK1G1Q9HCP0 422 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 ZSCAN32Q9NX65 697 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 CPQQ9Y646 472 aa18.74■□□□□ 0.59
TPM4-206ENST00000587201 BIN1O00499 593 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 OLFM2O95897 454 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 GJA4P35212 333 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 CXCL12P48061 93 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 ZXDBP98169 803 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 NR1H3Q13133 447 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 CCINQ13939 588 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 EML3Q32P44 896 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 SYNPOQ8N3V7 929 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 SPEM1Q8N4L4 309 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 EXOC4Q96A65 974 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 JAKMIP2Q96AA8 810 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 LINC00597Q9H2U6 94 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 METTL14Q9HCE5 456 aaKnown RBP18.73■□□□□ 0.59
TPM4-206ENST00000587201 SMPD4Q9NXE4 827 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 IL37Q9NZH6 218 aa18.73■□□□□ 0.59
TPM4-206ENST00000587201 CHMP5Q9NZZ3 219 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms