RNA–Protein interactions for RNA: ENST00000586636.5

CIRBP-210, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-210ENST00000586636 TDRD10Q5VZ19 366 aaKnown RBP19.53■□□□□ 0.72
CIRBP-210ENST00000586636 PRR23CQ6ZRP0 262 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 CAMKK1Q8N5S9 505 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 B3GALNT2Q8NCR0 500 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 RPLP0P6Q8NHW5 317 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 GPT2Q8TD30 523 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 GAB3Q8WWW8 586 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 ZNF518BQ9C0D4 1074 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 XYLT2Q9H1B5 865 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 LINC00597Q9H2U6 94 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 RCOR1Q9UKL0 485 aa19.53■□□□□ 0.72
CIRBP-210ENST00000586636 ZNF840PA6NDX5 716 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 CLDN5O00501 218 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 KLRC4O43908 158 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 AP3M2P53677 418 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 CACNA2D1P54289 1103 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 ZXDBP98169 803 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 TAF10Q12962 218 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 STK4Q13043 487 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 ZNF699Q32M78 642 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 PLEKHO2Q8TD55 490 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 NETO1Q8TDF5 533 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 PAGE5Q96GU1 130 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 SLITRK1Q96PX8 696 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 B3GNT5Q9BYG0 378 aa19.52■□□□□ 0.72
CIRBP-210ENST00000586636 POLR3BQ9NW08 1133 aaPredicted RBP19.52■□□□□ 0.72
CIRBP-210ENST00000586636 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-210ENST00000586636 DCDC2BA2VCK2 349 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 LRRIQ3A6PVS8 624 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-210ENST00000586636 ACTN4O43707 911 aaKnown RBP19.51■□□□□ 0.71
CIRBP-210ENST00000586636 SLC7A9P82251 487 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 KMT5BQ4FZB7 885 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 ZNF667Q5HYK9 610 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 CACNA2D4Q7Z3S7 1137 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 KIAA0895Q8NCT3 520 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 PARD3BQ8TEW8 1205 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 EZH1Q92800 747 aaPredicted RBP19.51■□□□□ 0.71
CIRBP-210ENST00000586636 ACDQ96AP0 544 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 HHIPQ96QV1 700 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 RNF38Q9H0F5 515 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 SMYD3Q9H7B4 428 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 VRTNQ9H8Y1 702 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 TMEM30AQ9NV96 361 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 CPQQ9Y646 472 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 ATP8B3O60423 1300 aa19.51■□□□□ 0.71
CIRBP-210ENST00000586636 AXIN1O15169 862 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 FOXD2O60548 495 aaPredicted RBP19.5■□□□□ 0.71
CIRBP-210ENST00000586636 OLFM2O95897 454 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 RAP1GAPP47736 663 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 CDH8P55286 799 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 UBE2HP62256 183 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 NCOA4Q13772 614 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 SCARA5Q6ZMJ2 495 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 SYT13Q7L8C5 426 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 FILIP1Q7Z7B0 1213 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 NUP93Q8N1F7 819 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 CCDC26Q8TAB7 109 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 MED10Q9BTT4 135 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 SMPD4Q9NXE4 827 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 SPTBN2O15020 2390 aa19.5■□□□□ 0.71
CIRBP-210ENST00000586636 A0A1B0GVL5 298 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 AKAP3O75969 853 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 RTN3O95197 1032 aaPredicted RBP19.49■□□□□ 0.71
CIRBP-210ENST00000586636 OAS1P00973 400 aaKnown RBP19.49■□□□□ 0.71
CIRBP-210ENST00000586636 C4BPAP04003 597 aaKnown RBP19.49■□□□□ 0.71
CIRBP-210ENST00000586636 MBL2P11226 248 aaPredicted RBP19.49■□□□□ 0.71
CIRBP-210ENST00000586636 PFKFB1P16118 471 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 YWHAQP27348 245 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 CLDN10P78369 228 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 KRT85P78386 507 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 DMC1Q14565 340 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 CAVIN1Q6NZI2 390 aaKnown RBP19.49■□□□□ 0.71
CIRBP-210ENST00000586636 KBTBD6Q86V97 674 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 SLC9A9Q8IVB4 645 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 FBXO32Q969P5 355 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 LOXL4Q96JB6 756 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 TNIP3Q96KP6 325 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 ARRDC1-AS1Q9H2J1 176 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 DMAC2Q9NW81 257 aa19.49■□□□□ 0.71
CIRBP-210ENST00000586636 PDXKO00764 312 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 SLC9A3R1O14745 358 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-210ENST00000586636 SLC30A4O14863 429 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 CMA1P23946 247 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 OPRD1P41143 372 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 ZSCAN23Q3MJ62 389 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 FAM35AQ86V20 835 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 DDX42Q86XP3 938 aaKnown RBP eCLIP19.48■□□□□ 0.712e-6■■■□□ 17.9
CIRBP-210ENST00000586636 KIAA1958Q8N8K9 716 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 PDZD8Q8NEN9 1154 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 OVCA2Q8WZ82 227 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 ELMO3Q96BJ8 720 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 KCNK16Q96T55 309 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 SCAND2PQ9GZW5 306 aaPredicted RBP19.48■□□□□ 0.71
CIRBP-210ENST00000586636 KCTD10Q9H3F6 313 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 GRPEL1Q9HAV7 217 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 CFAP97Q9P2B7 532 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 USP25Q9UHP3 1055 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 NCOR2Q9Y618 2525 aa19.48■□□□□ 0.71
CIRBP-210ENST00000586636 SCAMP3O14828 347 aaKnown RBP19.47■□□□□ 0.71
CIRBP-210ENST00000586636 GDF9O60383 454 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms