RNA–Protein interactions for RNA: ENST00000585437.1

ATG4D-202, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-202ENST00000585437 TAF12Q16514 161 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 SLC44A4Q53GD3 710 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 TXNDC8Q6A555 127 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 KLHL10Q6JEL2 608 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 CCDC105Q8IYK2 499 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 TTC39CQ8N584 583 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 LMO3Q8TAP4 145 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 SLC2A14Q8TDB8 520 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 OVCA2Q8WZ82 227 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 MRPS31Q92665 395 aaKnown RBP9.16□□□□□ -0.94
ATG4D-202ENST00000585437 USP13Q92995 863 aaPredicted RBP9.16□□□□□ -0.94
ATG4D-202ENST00000585437 SLC22A12Q96S37 553 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 HNRNPABQ99729 332 aaKnown RBP9.16□□□□□ -0.94
ATG4D-202ENST00000585437 SMOQ99835 787 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 ARID3AQ99856 593 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 NT5C1AQ9BXI3 368 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 OSBPL6Q9BZF3 934 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 BRD9Q9H8M2 597 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 DMAP1Q9NPF5 467 aaPredicted RBP9.16□□□□□ -0.94
ATG4D-202ENST00000585437 HEBP1Q9NRV9 189 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 KRT82Q9NSB4 513 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 EHD2Q9NZN4 543 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 RWDD2AQ9UIY3 292 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 MAGED2Q9UNF1 606 aaPredicted RBP9.16□□□□□ -0.94
ATG4D-202ENST00000585437 CCL26Q9Y258 94 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.16□□□□□ -0.94
ATG4D-202ENST00000585437 WDR87Q6ZQQ6 2873 aa9.16□□□□□ -0.94
ATG4D-202ENST00000585437 EML5Q05BV3 1969 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 CACNA1HO95180 2353 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 F5P12259 2224 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 KANSL1LA0AUZ9 987 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 C2orf78A6NCI8 922 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 HHLA1C9JL84 531 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 P4HA2O15460 535 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 NRDCO43847 1150 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 BEST1O76090 585 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 CLSTN1O94985 981 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 GNA14O95837 355 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 OAS1P00973 400 aaKnown RBP9.15□□□□□ -0.94
ATG4D-202ENST00000585437 ZDHHC11BP0C7U3 371 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 GLULP15104 373 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 GDI1P31150 447 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 AVPR1AP37288 418 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 PPP3CCP48454 512 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 GSDMDP57764 484 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 ORC1Q13415 861 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 ZNF77Q15935 545 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 CCDC40Q4G0X9 1142 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 ARHGAP29Q52LW3 1261 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 SNX30Q5VWJ9 437 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 CLEC20AQ6ZU45 233 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 TPRG1Q6ZUI0 275 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 NUP93Q8N1F7 819 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 CELF5Q8N6W0 485 aaKnown RBP9.15□□□□□ -0.94
ATG4D-202ENST00000585437 MAB21L3Q8N8X9 362 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 C12orf29Q8N999 325 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 SLC4A11Q8NBS3 891 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 CCDC150Q8NCX0 1101 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 FLCNQ8NFG4 579 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 BPIFB1Q8TDL5 484 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 TATDN2Q93075 761 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 MSANTD3Q96H12 275 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 SHDQ96IW2 340 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 KCNK16Q96T55 309 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 FAM83CQ9BQN1 747 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 FOXQ1Q9C009 403 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 SMG9Q9H0W8 520 aaKnown RBP9.15□□□□□ -0.94
ATG4D-202ENST00000585437 PNPLA8Q9NP80 782 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 LTB4R2Q9NPC1 389 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.15□□□□□ -0.945e-7■■■■■ 26.9
ATG4D-202ENST00000585437 CISHQ9NSE2 258 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 FAM49BQ9NUQ9 324 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 TDP1Q9NUW8 608 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 COMMD8Q9NX08 183 aa9.15□□□□□ -0.94
ATG4D-202ENST00000585437 CACNA1IQ9P0X4 2223 aa9.15□□□□□ -0.95
ATG4D-202ENST00000585437 MYOFQ9NZM1 2061 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 ZNF840PA6NDX5 716 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 ZNF263O14978 683 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 AP1G2O75843 785 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 RTN3O95197 1032 aaPredicted RBP9.14□□□□□ -0.95
ATG4D-202ENST00000585437 CD58P19256 250 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 ERCC5P28715 1186 aaPredicted RBP9.14□□□□□ -0.95
ATG4D-202ENST00000585437 TUBP50607 506 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 PDE6CP51160 858 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 SLC5A3P53794 718 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 RAD23BP54727 409 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 PTPN5P54829 565 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 STX17P56962 302 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 ZXDBP98169 803 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 NHLH1Q02575 133 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 FZD5Q13467 585 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 CUL2Q13617 745 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 IRF2BP1Q8IU81 584 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 KIAA1958Q8N8K9 716 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 PDZD8Q8NEN9 1154 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 CLDN23Q96B33 292 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 CHFRQ96EP1 664 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 CYFIP2Q96F07 1278 aa9.14□□□□□ -0.95
ATG4D-202ENST00000585437 SRRTQ9BXP5 876 aaKnown RBP9.14□□□□□ -0.95
ATG4D-202ENST00000585437 IMPACTQ9P2X3 320 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms