RNA–Protein interactions for RNA: ENST00000584897.5

SMCHD1-211, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 4,143 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-211ENST00000584897 CIAO1O76071 339 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CYP19A1P11511 503 aaPredicted RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RENBPP51606 427 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RRADP55042 308 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 LGALS4P56470 323 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RIPK4P57078 832 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 DUSP2Q05923 314 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 TIGD6Q17RP2 521 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC152Q4G0S7 254 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RGMBQ6NW40 437 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 KRBA2Q6ZNG9 492 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 LINS1Q8NG48 757 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 BRIX1Q8TDN6 353 aaKnown RBP2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF503Q96F45 646 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 MPP4Q96JB8 637 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RIPOR3Q96MK2 946 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CRB3Q9BUF7 120 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 KCTD10Q9H3F6 313 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 RIOX1Q9H6W3 641 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC39A2Q9NP94 309 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 TDP1Q9NUW8 608 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 CBLCQ9ULV8 474 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 ATP11BQ9Y2G3 1177 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 DLG5Q8TDM6 1919 aa2.17□□□□□ -2.06
SMCHD1-211ENST00000584897 PLXNA3P51805 1871 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 A0A0A6YYK5 440 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 POLRMTO00411 1230 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 FIBPO43427 364 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDHGA12O60330 932 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 TBC1D4O60343 1298 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDH8O95206 1070 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ZBED1O96006 694 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ENPP1P22413 925 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 HTR1BP28222 390 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 DDIT3P35638 169 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 EIF4A1P60842 406 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 TBX2Q13207 712 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 G3BP1Q13283 466 aaKnown RBP eCLIP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 FGL2Q14314 439 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 TERF2Q15554 542 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ABHD17BQ5VST6 288 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MBLAC2Q68D91 279 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 XRRA1Q6P2D8 792 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 TOGARAM2Q6ZUX3 1019 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ANKRD23Q86SG2 305 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 CCDC117Q8IWD4 279 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 FUKQ8N0W3 1084 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ZNF276Q8N554 614 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 JADE3Q92613 823 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 FATE1Q969F0 183 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 EIF2AK1Q9BQI3 630 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 CPPED1Q9BRF8 314 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MYL10Q9BUA6 226 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 UTP14AQ9BVJ6 771 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 B3GNT5Q9BYG0 378 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 GTPBP4Q9BZE4 634 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MANSC1Q9H8J5 431 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 KLHL11Q9NVR0 708 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 RRN3Q9NYV6 651 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 LUZP4Q9P127 313 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 STAP2Q9UGK3 403 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 CDC23Q9UJX2 597 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PACSIN3Q9UKS6 424 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDHGA9Q9Y5G4 932 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDHGA8Q9Y5G5 932 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDHGA7Q9Y5G6 932 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDHGA6Q9Y5G7 932 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PCDHGA3Q9Y5H0 932 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 NR2E3Q9Y5X4 410 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 KMT2BQ9UMN6 2715 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MROH5Q6ZUA9 1318 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 SH3TC1Q8TE82 1336 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 TCRBV5S4A2TA0A5A2 114 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 AKR1B10O60218 316 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 UBXN7O94888 489 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PARP1P09874 1014 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 PDCP20941 246 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ABCB4P21439 1286 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 GSTO1P78417 241 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 SLC6A3Q01959 620 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ODF1Q14990 250 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ACAP1Q15027 740 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ELAVL1Q15717 326 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 RABL3Q5HYI8 236 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 CFAP58Q5T655 872 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 FKBP1CQ5VVH2 108 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 TRIM68Q6AZZ1 485 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ZSCAN25Q6NSZ9 544 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 USP45Q70EL2 814 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 DIS3LQ8TF46 1054 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 NOC3LQ8WTT2 800 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 SKA1Q96BD8 255 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 SEZ6LQ9BYH1 1024 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MS4A5Q9H3V2 200 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 SEPSECSQ9HD40 501 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 ADARB2Q9NS39 739 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 RXFP3Q9NSD7 469 aa2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 MAP3K20Q9NYL2 800 aaKnown RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 C9orf78Q9NZ63 289 aaPredicted RBP2.16□□□□□ -2.06
SMCHD1-211ENST00000584897 COL4A3Q01955 1670 aa2.16□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms